Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5683g00002 ATGCCTCAATCTTCTAACATTAAGGTTTTGAGAGATGAAGGAGTGCCTCAGTCTTCTGTCTTTACCCTATTATCTAGATATGCAGATGTGGCATTTATAAATCAGTCAGTTTTTGCTGAATATATCAAATTTGTCAAGGAAATAGGAATCAAACCTTTCAAGCCTGCATCTGTTGAAGCACTTGTTATTGTAACAAAGTTGAGTAAATCAACCTGGGAGTTGAAGCTGGATATCTTTGAGAGATTCGGCTGGCCCAGGGATGTCGCTCTCTTGGCATTCAATAAGGTTCCAAATATCATGGCTTTGTCAGAGAAAAAAATCACAAACTCAATGAAATTTTATATAGAGGAAGTGGGTTTGCAATTGGAAGACATAGTTGGGCGCCCGAATATTCTTAGATATAGCTTGAAGAAGAGGATTGTTCCTAGATGTTCAGTAGTAAAAATTTTGAAGCTGAAGGGTTTCATTAAGGATGACGTGTCCATTCCTCGTTTGATTACCACCAGCGAGAAAATTTTTATGGAAAATTATGTGATTAAATTTCAGGAAAGTGTTCCTCAGCTACAGAAACTCTATGTAGGTGAATTGGGGCCTTTACCTGAAGTTTTGGCGTAG 615 0.3789 MPQSSNIKVLRDEGVPQSSVFTLLSRYADVAFINQSVFAEYIKFVKEIGIKPFKPASVEALVIVTKLSKSTWELKLDIFERFGWPRDVALLAFNKVPNIMALSEKKITNSMKFYIEEVGLQLEDIVGRPNILRYSLKKRIVPRCSVVKILKLKGFIKDDVSIPRLITTSEKIFMENYVIKFQESVPQLQKLYVGELGPLPEVLA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5683g00002 204 PANTHER CGI-12 PROTEIN-RELATED 5 180 IPR003690 GO:0003690|GO:0006355
Pral5683g00002 204 Gene3D Transcription termination factor 3, mitochondrial 4 187 IPR038538 -
Pral5683g00002 204 FunFam Mitochondrial transcription termination factor-like 3 185 - -
Pral5683g00002 204 SMART mt_12 122 156 IPR003690 GO:0003690|GO:0006355
Pral5683g00002 204 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Pral5683g00002 204 SMART mt_12 21 51 IPR003690 GO:0003690|GO:0006355
Pral5683g00002 204 Pfam mTERF 5 173 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5683g00002 Pral-Chr5683 6722 7336 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5683g00002 mTERF 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5683g00002 K15031 - qsu:112035834 177.948