Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00011 ATGCCTCAATCTTCTAACATTAAGGTTTTGAGAGATGAAGGAGTGCCTCAGTCTTCTGTCTTTACCCTATTATCTAGATATGCAGATGTGGCATTTATAAATCAGTCAGTTTTTGCTGAATATATCAAATTTGTCAAGGAAATAGGAATCAAACCTTTCAAGCCTGCATCTGTTGAAGCACTTGTTATTGTAACAAAGTTGAGTAAATCAACCTGGGAGTTGAAGCTGGATATCTTTGAGAGATTCGGCTGGCCCAGGGATGTCGCTCTCTTGGCATTCAATAAGGTTCCAAATATCATGGCTTTGTCAGAGAAAAAAATCACAAACTCAATGAAATTTTATATAGAGGAAGTGGGTTTGCAATTGGAAGACATAGTTGGGCGCCCGAATATTCTTAGATATAGCTTGAAGAAGAGGATTGTTCCTAGATGTTCAGTAGTAAAAATTTTGAAGCTGAAGGGTTTCATTAAGGATGACGTGTCCATTCCTCGTTTGATTACCACCAGCGAGAAAATTTTTATGGAAAATTATGTGATTAAATTTCAGGAAAGTGTTCCTCAGCTACAGAAACTCTATGTAGGTGAATTGGGCCTTTACCTGAAGTTTTGGCGTAGGCAGTTTCCTGGAGCGTTATGA 636 0.3821 MPQSSNIKVLRDEGVPQSSVFTLLSRYADVAFINQSVFAEYIKFVKEIGIKPFKPASVEALVIVTKLSKSTWELKLDIFERFGWPRDVALLAFNKVPNIMALSEKKITNSMKFYIEEVGLQLEDIVGRPNILRYSLKKRIVPRCSVVKILKLKGFIKDDVSIPRLITTSEKIFMENYVIKFQESVPQLQKLYVGELGLYLKFWRRQFPGAL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00011 211 Gene3D Transcription termination factor 3, mitochondrial 4 187 IPR038538 -
Pral5682g00011 211 Pfam mTERF 5 173 IPR003690 GO:0003690|GO:0006355
Pral5682g00011 211 FunFam Mitochondrial transcription termination factor-like 3 185 - -
Pral5682g00011 211 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Pral5682g00011 211 SMART mt_12 122 156 IPR003690 GO:0003690|GO:0006355
Pral5682g00011 211 SMART mt_12 21 51 IPR003690 GO:0003690|GO:0006355
Pral5682g00011 211 PANTHER CGI-12 PROTEIN-RELATED 5 180 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00011 Pral-Chr5682 59565 60286 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00011 mTERF 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00011 K15031 - qsu:112035834 178.333