Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00009 ATGGTAATTTTTCTGATTGCAAGATTATCTTCGTCATTGCGGACGGGATCCCAGTTAGGGTTTCTTCGTCACCATGGATCGCATATTTCCTGTTCGTTTTCTTCTGTTGCGCAATTATCTCAGTCAAATGGACCAAAACAAGATAGAGATGGGGATCATTCGTTTACGGCATTTTACCTCGTAAACTCATGTGGTATGTCCGCCAAAGTTGCTGGTAAAGTATCTAAAAGGATTGAACTGAAAGACTTAGATCAACCCAATTCGGTACTAAATCTTCTTAGAAGCTACGGATTCTCAGATCCGCAGATATCCAAAATTGTGGTATGCTGTCCACGGTTACTTATGGCAAATCCTGAGCATAATCTTTTGCCCAGACTAAGGTTTATGCAGTCTATAGGGTTCTCAGCTGATGAAATCCCAGAACTATTCTCTTATAACCCTTCATTACTATTGTATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCTCTTAGAAGTGTACTTGATGACGATTGGAAAGTAAGGAAATGTCTAAGATGCTCTACTTGGAGTATTTGCTCCTATGATGTAAAGAATATAGTCCCAAACATAAAAGTTTTGAGAGATGTGGGAGTGCCTCAATCTTCTGTCTTCTCTCTGATATGTAGACGTGCAAATTTAGTATTTATGAATCAATCAATGTTTGGTGAATATGTCAAGTTTGTCAAGGAAACAGGAATTGAACCTTTCAAGTTTGCGTTCGGTGAAGCACTTATAATTGTAACACAGATGAATAAATCAACCTGGGAGTCGAAACTGGATATGTTTGAGAAGTTGGGCTGGTCCAGGGATGTCACTCTTTCGGCATTCCGTAGGTTTCCACGTGTGATGGCTTTGTCAGAGAAAAATATCGCAAACACAATAAAGTTTTTCGTGGATGAAATGGGTCTACAGTTGGAAGATATAGCTAGATCCCCATCAATTCTTAGCTTTAGCTTGAAGCTGAGGATTATTCCTAGATGGTCAGTTGTTAAAATTTTGAAAAGTATGGGTTTAGTGAAGGATAATACGAGTCCTATTTCCATCATTATAGCCAATGAGCAAAAGTTTCTGGAAAGTTTTGTGATCAAATTTCAAGAAAGTGTTCCTCAGTTGCTGAAACTTTACAGAGGTGAACTGGGACCTTTACCTGAAGTTCATGCATAG 1188 0.388 MVIFLIARLSSSLRTGSQLGFLRHHGSHISCSFSSVAQLSQSNGPKQDRDGDHSFTAFYLVNSCGMSAKVAGKVSKRIELKDLDQPNSVLNLLRSYGFSDPQISKIVVCCPRLLMANPEHNLLPRLRFMQSIGFSADEIPELFSYNPSLLLYSLEKRIIPHYEALRSVLDDDWKVRKCLRCSTWSICSYDVKNIVPNIKVLRDVGVPQSSVFSLICRRANLVFMNQSMFGEYVKFVKETGIEPFKFAFGEALIIVTQMNKSTWESKLDMFEKLGWSRDVTLSAFRRFPRVMALSEKNIANTIKFFVDEMGLQLEDIARSPSILSFSLKLRIIPRWSVVKILKSMGLVKDNTSPISIIIANEQKFLESFVIKFQESVPQLLKLYRGELGPLPEVHA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00009 395 Gene3D Transcription termination factor 3, mitochondrial 170 376 IPR038538 -
Pral5682g00009 395 FunFam Mitochondrial transcription termination factor-like 154 376 - -
Pral5682g00009 395 Pfam mTERF 257 365 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 Pfam mTERF 90 242 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 PANTHER CGI-12 PROTEIN-RELATED 53 371 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Pral5682g00009 395 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00009 Pral-Chr5682 50392 52095 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00009 mTERF 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00009 K15031 - qsu:112035834 297.36