Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00008 ATGCTGAATTTTCTGATTGCAAGATTATCTTTGTCACTGCCAACCTGGAGGACAACCCAGTTAGGGTTTCTTCATCACAATGCATCCTTCTTTCGCTATTCGTTTTCTTCGGTTGCAAATTTATCTCAATCAAATCAACCCGAAAAAAATGGAGGTGGAAATTTTTCGTTTACGGTTTCTTACCTCATGAATTCATTTGGCATGCCAGCCGAAATTGCTGGTAAATTATCGAAATGGGTTGAACTGAAGGACCCAGATAAACACGACTCGGTGCTTAGTCTTTTTAGAAACTACGGATTCTCAGATACTCAGATATACAGAACCGTGAGATCCTTTCCTCATGTACTTTTATTAAATCCTGAGCACACGCTTTCGCCCAAACTAAAGTACCTCCATTCTGTAGGATTTTCACCTTCTGAAATTCCAGGACTAGTCTCTTCTAACCCTACATTACTAATTTTTAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAGGAGTACTTGGTGACGATTGGAAAGTAAGGAAATGTTTGAAAAACTCAAGGTGGAACGCTTGCTCTTATGGTGTAATGAATATAGTTCCAAACGTAAAGGTTTTGAGAGATGAAGGAGTTCCTCAATCTTCTGTCTTTACTCTGTTATCTAGAGGTGCCAATATAGCATTTATGAATCAATCAAAGTTTGTTGAATGTGTCAACTCTGTCAAGGAAATAGGAATCGAACCTTTCACGCGTGTGTTTGTTGATGCACTTGTAGTTATAACAATGTTGAATAAATCAACCTGGGAGTTGAAACTGGATATCTTTGAGAGGTGTGGGTGGTCCAGGGATGTCACTCTTTTGGCATTCAGTAAGGTTCCACGCATTATGTTTTTCTCAGAGCAAAAAATCACAAGCAACATGAAGTTTTTTGTGGATGAAATGGAATTACGGTTGGAAGATATAGCTGGATGCCCAACAATTCTTGGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGGTCTGTGGTTAAAATTTTGAAGACGAAGGGTTTAATCAAGGAACATGTGTCCCTAAATTCTGTTATCATCATGAGTGAGAAAAGGTTTCAGGAAAATTTTGTGATCAAATTTCAAGAAAGTGTTCCTCAGCTGCTGGAACTCTACAGCGGTTCTCGTGAATTGAGACCTCTACCTGAATTTCCAACGTTGGCAGTTTCTTGA 1212 0.3903 MLNFLIARLSLSLPTWRTTQLGFLHHNASFFRYSFSSVANLSQSNQPEKNGGGNFSFTVSYLMNSFGMPAEIAGKLSKWVELKDPDKHDSVLSLFRNYGFSDTQIYRTVRSFPHVLLLNPEHTLSPKLKYLHSVGFSPSEIPGLVSSNPTLLIFSLEKRIIPHYEALKGVLGDDWKVRKCLKNSRWNACSYGVMNIVPNVKVLRDEGVPQSSVFTLLSRGANIAFMNQSKFVECVNSVKEIGIEPFTRVFVDALVVITMLNKSTWELKLDIFERCGWSRDVTLLAFSKVPRIMFFSEQKITSNMKFFVDEMELRLEDIAGCPTILGYSLKQRIIPRWSVVKILKTKGLIKEHVSLNSVIIMSEKRFQENFVIKFQESVPQLLELYSGSRELRPLPEFPTLAVS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00008 403 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 PANTHER CGI-12 PROTEIN-RELATED 56 373 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 FunFam Mitochondrial transcription termination factor-like 160 378 - -
Pral5682g00008 403 Gene3D Transcription termination factor 3, mitochondrial 172 377 IPR038538 -
Pral5682g00008 403 Pfam mTERF 92 244 IPR003690 GO:0003690|GO:0006355
Pral5682g00008 403 Pfam mTERF 259 367 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00008 Pral-Chr5682 41374 42879 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00008 mTERF 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00008 K15031 - qsu:112035834 307.375