Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00007 ATGCTAACTTTTCTGTTGGCAAGATTATCTTCGTCACTGCCGTGTTGGAGGACAGCCCAGTTAGGGTTTCTTCATCGCAATGCATCCCACATTTCCTGTTCGTTTTATTCGGTTGCGCAATTATCTCAGTCAAGTCGACCAGAACAAAGTAGAGATGGGGATCTTTCGTTTACGCAATCTTACCTCATGAACTCATGTGGCATGTCTGCCAAAGTTGCTGGTAAAGTATCTGAGAGGATTGAATTGAAGGACCCATATCAACCGGATTCGGTACTTAATATTCTGAGAAGCTACGGATTCTCAGATCCACAGATATCCAAGATTGTGACGTGCTATCCACGGGTGCTTTTGGCCAATCCTGAGCACAATCTTTTGCCCAGGCTAAGGTTTATGCAGTCTGTGGGGTTCTCAGCTGCTGAAATCCCAGAACTCTTCTCGTATAACACTGCATTAGTGTTATATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAAGTGTGCTTTATGATGATTGGAAAGTGAGGAGATGTCTAAAATGCTCTACTTGGAGTATTTGCTCCTATGATGTAAAAAATATCGGCCCAAACATAAAGGTTTTAAGAGATGAAGGAGTGCCTCAATCTTTGGTCTTTTCCCTGTTATCTAGACGTGCAAATGTAGCATTCATGAATCAATCAATTTTTGCAGAATATGTCAAGTTTGTCAAGGAAACAGGAGTCGAACCTTTCAAGATTGGGTTTGTTGAAGCACTTATAGTTGTAGCTCAGTTGCGTAAATCAACCTGGGAGTCGAAACTGGGTATCTTTAAGAGATTTGGCTGGTCCCAAGGTGTCACACTCATGGCATTTAGTAAGGTTCCAAATATCATGGCTATGTCAGAGAAAAAGATCTCAGACGCAATGAAGTTTTTCATAGATGAAGTGGGTTTGCGGTTGGAAGATATAGCTGGACGACCGAATATTCTTAGGCATCTTGGTTCTGAAGGACCTTAA 1002 0.4182 MLTFLLARLSSSLPCWRTAQLGFLHRNASHISCSFYSVAQLSQSSRPEQSRDGDLSFTQSYLMNSCGMSAKVAGKVSERIELKDPYQPDSVLNILRSYGFSDPQISKIVTCYPRVLLANPEHNLLPRLRFMQSVGFSAAEIPELFSYNTALVLYSLEKRIIPHYEALKSVLYDDWKVRRCLKCSTWSICSYDVKNIGPNIKVLRDEGVPQSLVFSLLSRRANVAFMNQSIFAEYVKFVKETGVEPFKIGFVEALIVVAQLRKSTWESKLGIFKRFGWSQGVTLMAFSKVPNIMAMSEKKISDAMKFFIDEVGLRLEDIAGRPNILRHLGSEGP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00007 333 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 PANTHER CGI-12 PROTEIN-RELATED 56 325 IPR003690 GO:0003690|GO:0006355
Pral5682g00007 333 Gene3D Transcription termination factor 3, mitochondrial 148 330 IPR038538 -
Pral5682g00007 333 Pfam mTERF 92 318 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00007 Pral-Chr5682 36883 38730 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00007 mTERF 7.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00007 K15031 - qsu:112035834 245.358