Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00006 ATGTCCGCCGAAGTTGCTGGTAAAATATCGAAAAGTGTTGAACTGAAAGACCCGGATAAACACGACTCAGTACTTCGTCTTCTCAGGAGTTACGGATTCTCAGATACTCAGATATCCAGAACTGTGAAGTACTATCCACGGTTGCTATTGGCAAATCCCGAGCACAGTCTTTTGCCCAAACTGAGATTCATCCATTCGATAGGCTTTTCAGCTTCTGAACTCTCAGACCTGTTCTCTTTTAACCCTAAATTACTAATTTATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAAGTGTACTTGATGATGATCGGAAAGTAAGGAAATGTCTAAAATACTCTGCTTGGACTATGTGCTCCTATGATGTGAAGAATATATTTCCAAACTTAAAGGTTTTGAGGGATGAGGGGATGCCTCAATGTTCGGTCGTTTCGCTGTTATGTAGACGTGCAAATGTAGCATTTATGAATCAATCAATGTTTGTCGAATATGTCAAGTTTGTCAAGGAAACAGGAATAAATCCTTCCGAGGCTGCGTTTGTTGAAGCACTTTTAGCTGTGACACAGATGAGTAAATCAACCTGGGAGTCGAAACTGGATGCCTTTGAGAGTTGTGGCTGGCCCAGAGATGTCACTCTTTTGGCATTCAGTAAGTTTCCACAAATCATGTGTATGTCAGCGAAGAAAATCACAGACACAATGAAGTTTTTTGTGGATGAAATGGGTTTAAGGTCGGAAGATGTTGCTGGATGCCCAACGATTCTTAGTTATAGCTTGAAGCAGAGGATTGCTCCTAGATGGTCAGTAGTTAAAATTTTGAAAATGAAGGGTTTAATCAAAGAAAATGTGTCCCTAAATTATGTTATTATACTCAGTGAGAAAAAGTTTCTGGAAAATTTTGTGGTCAAATTTGAAGAAAGTGTTCCTCGACTCCTGAAAATCTATGAAGGTGACTCGAGCTTTTTACCTAAGTTCGGGCAGAGGCAGTTAGTTCCTAGATGTTGA 1014 0.3984 MSAEVAGKISKSVELKDPDKHDSVLRLLRSYGFSDTQISRTVKYYPRLLLANPEHSLLPKLRFIHSIGFSASELSDLFSFNPKLLIYSLEKRIIPHYEALKSVLDDDRKVRKCLKYSAWTMCSYDVKNIFPNLKVLRDEGMPQCSVVSLLCRRANVAFMNQSMFVEYVKFVKETGINPSEAAFVEALLAVTQMSKSTWESKLDAFESCGWPRDVTLLAFSKFPQIMCMSAKKITDTMKFFVDEMGLRSEDVAGCPTILSYSLKQRIAPRWSVVKILKMKGLIKENVSLNYVIILSEKKFLENFVVKFEESVPRLLKIYEGDSSFLPKFGQRQLVPRC 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00006 337 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 SMART mt_12 75 107 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 SMART mt_12 181 211 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 Pfam mTERF 169 300 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 Pfam mTERF 25 181 IPR003690 GO:0003690|GO:0006355
Pral5682g00006 337 FunFam Mitochondrial transcription termination factor-like 89 311 - -
Pral5682g00006 337 Gene3D Transcription termination factor 3, mitochondrial 106 310 IPR038538 -
Pral5682g00006 337 PANTHER CGI-12 PROTEIN-RELATED 2 306 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00006 Pral-Chr5682 32293 33306 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00006 mTERF 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00006 K15031 - jre:109008206 270.396