Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5682g00003 ATGCTTACTTATCTCATTGCCAGATTTTCTTCACTCTCCCGCGAGAGGAGGACCCACCTTGTTTCCCTTCATCAAAATGCCTCGCAGATTCTTAATTCCTTTTCTTCAGTTTCGAAATTCTCCGAATCAAATCAGCGGAAAGGAAAATCAGGAGAAACTAAAACTTGCACTGTTTCTTATCTTATAGACTCACTGGGTATGTCCTCCGAAGTAGCTATCAAAGTATCCAAAGGGGTTAAAATAGAAGGCCCTGATAGATCCAACTCGGTACTTAATCTTTTTAGGAGTTACGGATTCTCAGATTCCCAGATCTCTAAGGTTGTGGAGAAGTATCCGCGAGTCCTTTTGACAAAACCTGAGGTGACACTTTCGCCGAAGCTGAGGTTTTTCCGGTCTATAGGGTTTTCATATCCTGAACTGCCACAACTCATCACATATAACTCTGCACTCTTAGTTTTGAGCTTAAAGAAAAGTATCATTCCCCGATATGAAGCCCTTAAGAGCGTACTTGGAGATGATGCGAAAGCAACTATAGCTTTTAAACGCTGGGGTTGGTGCCACAAGGACGTAAACAATTTACCGTCGAACATAAGAGTTTTGAGGGAACACGGAGTGCCTCAGTCTTCTGTCTCTCAACTGGTTACTCATTTTGCAAGAGCTGTGATTATAAAGCCGGCAAAGTTTGTTGAACATGTCAAGTTTGCTAAGGAGATAGGAATCCAGCCAACTAAGGTTGCGTTCGTCCATGCAATTTTTGTCTTAGCAATGACAAATAAATTGACCTGGGAGTCAAAGCTGGATATCTATGAAAGGTGCGGCTGGTCAAGGGATGCCACTCTGTCAGCATTCAGTAAGTTTCCACATTGCATGCTGCTGTCAGAGGATAAAATCACAAGCAAAATGAAGTTTTTCGTGGATGAAATGGGTTTGTCTTTGGAAGATATAGTTAATTGCCCAACAATTCTTGGCTATCGCTTGAAGCAAAGGATTATTCCTAGATTCTCAGTAATTAAAATTTTGAAAACTAATGGTTTGATGAAACGTGATAGGTCCTTACGTTCCATTATCATCTTAAGTGAAAAGAAGTTTTTGGAAAAGTTTGTAATCAGATTTCAGGAAAGTGTTCCTGAGCTGTTGGACATTTATAAAAGTGGTTCTTGA 1161 0.4048 MLTYLIARFSSLSRERRTHLVSLHQNASQILNSFSSVSKFSESNQRKGKSGETKTCTVSYLIDSLGMSSEVAIKVSKGVKIEGPDRSNSVLNLFRSYGFSDSQISKVVEKYPRVLLTKPEVTLSPKLRFFRSIGFSYPELPQLITYNSALLVLSLKKSIIPRYEALKSVLGDDAKATIAFKRWGWCHKDVNNLPSNIRVLREHGVPQSSVSQLVTHFARAVIIKPAKFVEHVKFAKEIGIQPTKVAFVHAIFVLAMTNKLTWESKLDIYERCGWSRDATLSAFSKFPHCMLLSEDKITSKMKFFVDEMGLSLEDIVNCPTILGYRLKQRIIPRFSVIKILKTNGLMKRDRSLRSIIILSEKKFLEKFVIRFQESVPELLDIYKSGS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5682g00003 386 PANTHER CGI-12 PROTEIN-RELATED 55 370 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 Gene3D Transcription termination factor 3, mitochondrial 176 374 IPR038538 -
Pral5682g00003 386 SMART mt_12 211 241 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 SMART mt_12 28 68 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 SMART mt_12 312 346 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 Pfam mTERF 261 364 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 Pfam mTERF 91 251 IPR003690 GO:0003690|GO:0006355
Pral5682g00003 386 FunFam Mitochondrial transcription termination factor-like 155 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5682g00003 Pral-Chr5682 14914 21732 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5682g00003 mTERF 8.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5682g00003 K15031 - gmx:100788793 314.694