Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5680g00006 ATGGATCCAGAACTCTGCGTTAATGGCTGTGGCTTCTTCGGCTCTTACGCGAATCATAACATGTGCTCCAAGTGTTACAAGGATCATATTTCCAAGATCAATCAAAACATGATAATCAGTGAATCAATTAGAAACCTCACCATATCGTCTTCTTCTCCATCTGCTTCTTCATCTGATGAACACAAGAATGATGAGTCCTCGTCGACCGGCATGAACTTTGCGGCCGCCGTTTCTAAACCACCTGATGAATCTCAAGAGAAAAAGAGATGCAAGAGTTGCAATAAAAAGGTCGGGCTAACAGGATTCAGGTGCCGATGTGGAGACTTGTTTTGTGGGAAACATAGATATCCACAAGAACATTCATGCGCTGCGGATTATAAGCGAAGGGGTCGTCGACTCATCAGAAAACAAAACCCGCTTTGTAGTGCTGATAAACTATCAAAAGTTTAG 450 0.4289 MDPELCVNGCGFFGSYANHNMCSKCYKDHISKINQNMIISESIRNLTISSSSPSASSSDEHKNDESSSTGMNFAAAVSKPPDESQEKKRCKSCNKKVGLTGFRCRCGDLFCGKHRYPQEHSCAADYKRRGRRLIRKQNPLCSADKLSKV 149
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral5680g00006 149 MobiDBLite consensus disorder prediction 48 88 - -
Pral5680g00006 149 Gene3D - 74 133 IPR035896 -
Pral5680g00006 149 SUPERFAMILY AN1-like Zinc finger 79 144 IPR035896 -
Pral5680g00006 149 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Pral5680g00006 149 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 42 - -
Pral5680g00006 149 SMART AN1_Zf_4 90 127 IPR000058 GO:0008270
Pral5680g00006 149 Pfam AN1-like Zinc finger 90 127 IPR000058 GO:0008270
Pral5680g00006 149 Gene3D - 1 69 - -
Pral5680g00006 149 FunFam Zinc finger AN1-type containing 6 54 145 - -
Pral5680g00006 149 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Pral5680g00006 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 148 - -
Pral5680g00006 149 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Pral5680g00006 149 ProSiteProfiles Zinc finger AN1-type profile. 84 130 IPR000058 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral5680g00006 Pral-Chr5680 24977 25426 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5680g00006 5 149 C2H2 Transcription Factor Family AT3G52800 41.026 3.11e-29 103
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5680g00006 - - pcin:129303887 196.052