Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5680g00006 | ATGGATCCAGAACTCTGCGTTAATGGCTGTGGCTTCTTCGGCTCTTACGCGAATCATAACATGTGCTCCAAGTGTTACAAGGATCATATTTCCAAGATCAATCAAAACATGATAATCAGTGAATCAATTAGAAACCTCACCATATCGTCTTCTTCTCCATCTGCTTCTTCATCTGATGAACACAAGAATGATGAGTCCTCGTCGACCGGCATGAACTTTGCGGCCGCCGTTTCTAAACCACCTGATGAATCTCAAGAGAAAAAGAGATGCAAGAGTTGCAATAAAAAGGTCGGGCTAACAGGATTCAGGTGCCGATGTGGAGACTTGTTTTGTGGGAAACATAGATATCCACAAGAACATTCATGCGCTGCGGATTATAAGCGAAGGGGTCGTCGACTCATCAGAAAACAAAACCCGCTTTGTAGTGCTGATAAACTATCAAAAGTTTAG | 450 | 0.4289 | MDPELCVNGCGFFGSYANHNMCSKCYKDHISKINQNMIISESIRNLTISSSSPSASSSDEHKNDESSSTGMNFAAAVSKPPDESQEKKRCKSCNKKVGLTGFRCRCGDLFCGKHRYPQEHSCAADYKRRGRRLIRKQNPLCSADKLSKV | 149 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5680g00006 | 149 | MobiDBLite | consensus disorder prediction | 48 | 88 | - | - | |
Pral5680g00006 | 149 | Gene3D | - | 74 | 133 | IPR035896 | - | |
Pral5680g00006 | 149 | SUPERFAMILY | AN1-like Zinc finger | 79 | 144 | IPR035896 | - | |
Pral5680g00006 | 149 | ProSiteProfiles | Zinc finger A20-type profile. | 1 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Pral5680g00006 | 149 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 5 | 42 | - | - | |
Pral5680g00006 | 149 | SMART | AN1_Zf_4 | 90 | 127 | IPR000058 | GO:0008270 | |
Pral5680g00006 | 149 | Pfam | AN1-like Zinc finger | 90 | 127 | IPR000058 | GO:0008270 | |
Pral5680g00006 | 149 | Gene3D | - | 1 | 69 | - | - | |
Pral5680g00006 | 149 | FunFam | Zinc finger AN1-type containing 6 | 54 | 145 | - | - | |
Pral5680g00006 | 149 | SMART | A20_3 | 3 | 27 | IPR002653 | GO:0003677|GO:0008270 | |
Pral5680g00006 | 149 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 2 | 148 | - | - | |
Pral5680g00006 | 149 | Pfam | A20-like zinc finger | 5 | 27 | IPR002653 | GO:0003677|GO:0008270 | |
Pral5680g00006 | 149 | ProSiteProfiles | Zinc finger AN1-type profile. | 84 | 130 | IPR000058 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5680g00006 | Pral-Chr5680 | 24977 | 25426 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5680g00006 | 5 | 149 | C2H2 Transcription Factor Family | AT3G52800 | 41.026 | 3.11e-29 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5680g00006 | - | - | pcin:129303887 | 196.052 |