Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5679g00001 ATGTTTTCTGACAAAATCACTATATTCTGGAACAACAAATCTCAAGCTCATCAAGATTTTGAGGCCTTTCTAAAGAGCCACAAATCACTTGCCACAAACAGATATACCTACTCTGAGATAAAGAAAATGACCAATTGTTTCCAAGAAAAATTAGGGCAAGGAGGCTATGGAAGTGTGTTCAAAGGGAAGTTACATGATGAGTGTCTAGTTGCTGTGAAGGTTTTGAATGAAACAAAAAGTAATGGGGAGGAATTCCTCAATGAGGTAGCAAGTATAAGCAAGACTTCCCATGTTAACATTGTCACTCTTCTGGGACTTTGTTTTGAAGGACCAAAGAAGGCACTTGTTTATGAGTTTATGGCTAACGGATCGTTAGAGAAGTTCATCTTTGAAAATGAAGCCAACCTCCTTAATGGTAACCTCCAATTGAGCTGTGAAATATTGCATCAAATTGCAGTGGGTGTTGCACGAGGACTAGAGTATTTGCACAGAGGATGTAATGCTCGGATATTGCATTTTGACATAAAACCTCACAACATTTTGTTGGATGAGAACTTTTGCCCAAAGATCTCTGATTTTGGATTAGCAAAAATATGTCCTAGAAATGAAAGTGCTGTATCCATGTGGGGTGCCAGAGGAACTATCGGATATATTGCTCCTGAGGTATTTTCTAGAAATTTTGGTGTCGTCTCTCACAAATCAGATGTTTATAGTTTTGGGATGATGGTTTTAGAAATGATTGGAGGAAGAAGGAATGTTAATGTCAATGTTAACAATACTAGTGAAATATATTTTCCTCATTGGATTTACAAGCGTCTAGAATTCAATGAAGACCTTGCACTGAGGAGCATTAGAAATGAAACTGACCAAGAGAGGATAAGACAGATGGTTATAACAAGCTTATGGTGCATACAAACTAACCCTTCAAACCGTCCAGTGATGAATAAAGTGGTGGAGATGCTTGAGGGCAGAGTTGGGACCTTGCAGGTCCCACCTAAGCCTTACTTATCATCTCCTTCAAGATCACCATGCTCTTTCTCTTCATCAACTCACTGA 1056 0.3873 MFSDKITIFWNNKSQAHQDFEAFLKSHKSLATNRYTYSEIKKMTNCFQEKLGQGGYGSVFKGKLHDECLVAVKVLNETKSNGEEFLNEVASISKTSHVNIVTLLGLCFEGPKKALVYEFMANGSLEKFIFENEANLLNGNLQLSCEILHQIAVGVARGLEYLHRGCNARILHFDIKPHNILLDENFCPKISDFGLAKICPRNESAVSMWGARGTIGYIAPEVFSRNFGVVSHKSDVYSFGMMVLEMIGGRRNVNVNVNNTSEIYFPHWIYKRLEFNEDLALRSIRNETDQERIRQMVITSLWCIQTNPSNRPVMNKVVEMLEGRVGTLQVPPKPYLSSPSRSPCSFSSSTH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5679g00001 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Pral5679g00001 351 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Pral5679g00001 351 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Pral5679g00001 351 SMART serkin_6 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5679g00001 351 MobiDBLite consensus disorder prediction 332 351 - -
Pral5679g00001 351 Pfam Protein tyrosine and serine/threonine kinase 47 321 IPR001245 GO:0004672|GO:0006468
Pral5679g00001 351 FunFam S-receptor-like serine/threonine-protein kinase 11 119 - -
Pral5679g00001 351 MobiDBLite consensus disorder prediction 333 351 - -
Pral5679g00001 351 ProSiteProfiles Protein kinase domain profile. 45 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5679g00001 351 Gene3D Phosphorylase Kinase; domain 1 17 119 - -
Pral5679g00001 351 FunFam PR5-like receptor kinase 120 333 - -
Pral5679g00001 351 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 339 IPR045874 GO:0004672
Pral5679g00001 351 SUPERFAMILY Protein kinase-like (PK-like) 28 322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5679g00001 Pral-Chr5679 17978 19033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5679g00001 34 336 Receptor kinase-like Gene Family AT4G18250 56.270 1.48e-121 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5679g00001 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5679g00001 - - pcin:129284583 507.679