Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5674g00004 ATGGGGAAATCCGGGGGTAGGAAAAAGAAGGGTGGTTCAAATCAAGTTGTTGCTGATAATTCGGCTCCAAGTGCTAATGGTGGTGTGGATTTAGACTCTTCAGTCTTTCTGAAAAGAGCCCTTGAGCTCAAAGAAGAAGGGAACAAGAGATTTCAAAACAAGGACTATGCTGGTGCCCTTGGGCAGTATGAGAATGCTCTTCGGCTAACCCCCAAGACCCACCCTGAGAGAGCGGTCTTTCACAGCAACAGAGCGGCATGCTTGATGCAAATGAAGCCCATAGATTACGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCATTACGTCCGGGCACTTCTTCGGAGGGCTCGGGCATTTGAGGCTATAGGGAAGTATGAAATGGCCATGCAGGATGTCCAAGGCTTACTGGCATCTGACCCTAATCATCGGGATGCTCTGGAGATTGCCCAGAGACTGAGGACAGCACTAGGTCCTCGCCAGGAAGCCCAGCAGGATCTTCAGAGTCGGCCATCCCCTGCTGCTCTTGGTGCTTCTGCAGTCCGTGGGGCCCCTATTGCTGGTTTAGGGCCATGTTTACCGGCCAGGCCAGCGGCAAAGAAAGCGGCAAACGCAGCAGGTGGTTCAGTTGCCCCTGCTAACAGTAAGCCAGAGAAGTCCCAACCAACTTTAGTTACTGAAAATGGTCCTGAGACCAAGCCGCAAATGCCAAAAGTTGTATTGAAGCCTTCAAATGCTTCAGCAAGATCACTGAACCCAAGAAAAGAAAACTACAATGAACTGTCATTGCATTCATCAATTACTCATGGACAGCATTTAGAATTTGCAATTCAGTGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCCCGGATGCCAGTGAATTGCAATTTTAGAACACTAAGAGATATAGTGAGTAAAAGATTTCCATCATCTAAGTCAGTTCTGATCAAGTATAAGGATAGCGATGGTGATTTGGTGACAATAACTTCTACTGAGGAGCTTAGACTAGCAGAATCTAGTGCAGATAGCCATCTTATAAGAGAGCCTGATGCAGATAAAAGTGATTCTGTTGGCACGTTGAGACTGCACATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAGTGAAGGCATCAAGGGAGATGAGAGTGGGTCACATACTTCCCAAAGTGAATGTGTCCTAGAGGCTCCAGAGACCGAGGTTGATAAAATGGGGAAAGAAGCTCCCAAAGAGAAACAAACAACCACAGAAGATGCTGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCCCATGTGGGCATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCTGAGGCGCTTGAGGAAACAGTAACTAGCGAGGAGGCTCAAGATCTCTTTGACAAAGCTGCTTCAAAGTTCCAGGAGGTAGCTGCTTTGGCATTCTTCAATTGGGGAAATATTCACATGTGTGCAGCTAGAAAACGAATTCCCTTAGACGAGTCAGGTGAGAAGGAAGTGGCAGAGCAGCTTCAAGTGGCTTATGATTGGGTCAAGGAAAAATATTCGTTGGCAAGGAAGAAGTATGAAGAAGCCCTTTTAATAAAACCAGACTTCTATGAGGGATTGCTAGCTCTGGGACAGCAACAATTTGAGATGGCCAAACTTAATTGGTCATTTGCACTTGCTAAGAAGATGGATTTATCAGCTTGGGATTCTTCAGAGACACTTAAACTCTTTGACAGTGCAGAGGAGAAGATGAAAGCTGCAACTGATATGTGGGAAAAGCTGGAAGAGCAGAGGGCAAATGAGCTAAAAGATCCTAATGCAACCAAGAAAGAGGAACTACTGAGAAGAAGGAAAAAACAGGGAGCTGCTGCTGAAGGTGAGACCTCTGCGGTTGGTGGTCATGGTGATATATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGATCACAGATTCACCTCTTCTGGGGGAATATGCTATTTGAAAGATCCCAAGTCGAATGCAAATTAGGGATGGGTGGTTGGAAGAAAAATTTGGATACAGCGGTGGAGCGTTTTAAACTTGCAGGTGCTTCTGAGACTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGGGATGCAAAGGAAGATGAGAAAAAGATTCAGAACTCCCAACCCAACAAGACTGGTGAAACTGACAAGACCAGTGAGACCAGTCATGTATGA 2307 0.4595 MGKSGGRKKKGGSNQVVADNSAPSANGGVDLDSSVFLKRALELKEEGNKRFQNKDYAGALGQYENALRLTPKTHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPHYVRALLRRARAFEAIGKYEMAMQDVQGLLASDPNHRDALEIAQRLRTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPAAKKAANAAGGSVAPANSKPEKSQPTLVTENGPETKPQMPKVVLKPSNASARSLNPRKENYNELSLHSSITHGQHLEFAIQWRPLKLVYDHDIRLARMPVNCNFRTLRDIVSKRFPSSKSVLIKYKDSDGDLVTITSTEELRLAESSADSHLIREPDADKSDSVGTLRLHIVEVSPEQEPPLPEEEEVKPVESEGIKGDESGSHTSQSECVLEAPETEVDKMGKEAPKEKQTTTEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKEXVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSAWDSSETLKLFDSAEEKMKAATDMWEKLEEQRANELKDPNATKKEELLRRRKKQGAAAEGETSAVGGHGDISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKKNLDTAVERFKLAGASETDISLVLKNHCSNGDAKEDEKKIQNSQPNKTGETDKTSETSHV 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5674g00004 769 MobiDBLite consensus disorder prediction 375 411 - -
Pral5674g00004 769 Gene3D Tetratricopeptide repeat domain 37 169 IPR011990 GO:0005515
Pral5674g00004 769 SMART PB1_new 283 375 IPR000270 GO:0005515
Pral5674g00004 769 MobiDBLite consensus disorder prediction 739 769 - -
Pral5674g00004 769 CDD PB1 286 372 - -
Pral5674g00004 769 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Pral5674g00004 769 MobiDBLite consensus disorder prediction 218 234 - -
Pral5674g00004 769 MobiDBLite consensus disorder prediction 159 183 - -
Pral5674g00004 769 MobiDBLite consensus disorder prediction 1 27 - -
Pral5674g00004 769 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Pral5674g00004 769 MobiDBLite consensus disorder prediction 648 670 - -
Pral5674g00004 769 Coils Coil 609 629 - -
Pral5674g00004 769 PANTHER PROTEIN CLMP1 1 757 IPR044517 -
Pral5674g00004 769 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Pral5674g00004 769 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Pral5674g00004 769 Gene3D - 285 355 - -
Pral5674g00004 769 SMART tpr_5 78 113 IPR019734 GO:0005515
Pral5674g00004 769 SMART tpr_5 114 147 IPR019734 GO:0005515
Pral5674g00004 769 SMART tpr_5 40 73 IPR019734 GO:0005515
Pral5674g00004 769 MobiDBLite consensus disorder prediction 383 400 - -
Pral5674g00004 769 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Pral5674g00004 769 SUPERFAMILY CAD & PB1 domains 281 354 - -
Pral5674g00004 769 MobiDBLite consensus disorder prediction 208 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5674g00004 Pral-Chr5674 11297 14152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5674g00004 30 161 Calmodulin-binding Proteins AT3G25230 29.371 3.28e-10 61.6