Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5674g00003 | ATGACGTTGGATATCTCCAACGGCGAGTTTTTGCGCATGGCGAGCGAGGCTCCGGAATCCTTCACCGTCGGTATTGTGCAGCCGCGAACATCTGCCGAGAGCGGGGACGGTAACGGGACGGGTGGGGAGGAGATGTTGATGCCTCCCCTGAACTTCGGGATGGTCGATTATGGCATTTTTAGGTCTGGCTTCCCTGATTCCGCCAGCTTCGGATTCTTGAAAACCCTTCGCCTACGTTCCATTATATGTTTGTTCCCTGACGAGTATCCCGAAGCCAATTTGGAGTTCTTGAAGGCTAATGGAATAAGGCTTTATCAATTCGGAATCGATGGCTCGAAGGATCTTTTGACAAAAGACCCGGAAGATATAATTCGTGAGGCATTGAAAGTTATCCTAGATGTTGGGAACCATCCATTGCTCATTCATTGCAAAAGAGGAAAGCATCGCACTGGTTGTCTTGTGGGATGCTTAAGAAAATTGCAAAGATGGTGTCTATCATCCATTTTTGATGAGTATCAAAGTTTTGCAGCTGCTAAAGCTAGAGTGTCAGATCAGAGCTTCATAGCATTGTTTGATATTTCTGATTTTAAACCCCAGCCATTGTCATTTTCACCCTCACAAAAGTACAGTATTGACAAAGTCCTGGATGCTGTTCCATCCTACCCCTGA | 669 | 0.4619 | MTLDISNGEFLRMASEAPESFTVGIVQPRTSAESGDGNGTGGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPEANLEFLKANGIRLYQFGIDGSKDLLTKDPEDIIREALKVILDVGNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLSSIFDEYQSFAAAKARVSDQSFIALFDISDFKPQPLSFSPSQKYSIDKVLDAVPSYP | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5674g00003 | 222 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 45 | 195 | - | - | |
Pral5674g00003 | 222 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 45 | 195 | - | - | |
Pral5674g00003 | 222 | CDD | PFA-DSP_Siw14 | 45 | 192 | - | - | |
Pral5674g00003 | 222 | Gene3D | Protein tyrosine phosphatase superfamily | 45 | 195 | IPR029021 | - | |
Pral5674g00003 | 222 | Pfam | Tyrosine phosphatase family | 46 | 200 | IPR004861 | - | |
Pral5674g00003 | 222 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 141 | 151 | IPR016130 | GO:0016311|GO:0016791 | |
Pral5674g00003 | 222 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 51 | 202 | IPR020422 | GO:0006470|GO:0008138 | |
Pral5674g00003 | 222 | PRINTS | Plant and fungal dual specificity phosphatase signature | 102 | 116 | IPR020428 | GO:0016791 | |
Pral5674g00003 | 222 | PRINTS | Plant and fungal dual specificity phosphatase signature | 46 | 63 | IPR020428 | GO:0016791 | |
Pral5674g00003 | 222 | PRINTS | Plant and fungal dual specificity phosphatase signature | 83 | 96 | IPR020428 | GO:0016791 | |
Pral5674g00003 | 222 | PRINTS | Plant and fungal dual specificity phosphatase signature | 119 | 133 | IPR020428 | GO:0016791 | |
Pral5674g00003 | 222 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 46 | 192 | IPR029021 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5674g00003 | Pral-Chr5674 | 6566 | 9566 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5674g00003 | 41 | 210 | Protein tyrosine phosphatase (PTP) family | AT4G03960 | 66.471 | 5.26e-85 | 249 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5674g00003 | K18045 | - | qsa:O6P43_031297 | 273.478 |