Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5674g00003 ATGACGTTGGATATCTCCAACGGCGAGTTTTTGCGCATGGCGAGCGAGGCTCCGGAATCCTTCACCGTCGGTATTGTGCAGCCGCGAACATCTGCCGAGAGCGGGGACGGTAACGGGACGGGTGGGGAGGAGATGTTGATGCCTCCCCTGAACTTCGGGATGGTCGATTATGGCATTTTTAGGTCTGGCTTCCCTGATTCCGCCAGCTTCGGATTCTTGAAAACCCTTCGCCTACGTTCCATTATATGTTTGTTCCCTGACGAGTATCCCGAAGCCAATTTGGAGTTCTTGAAGGCTAATGGAATAAGGCTTTATCAATTCGGAATCGATGGCTCGAAGGATCTTTTGACAAAAGACCCGGAAGATATAATTCGTGAGGCATTGAAAGTTATCCTAGATGTTGGGAACCATCCATTGCTCATTCATTGCAAAAGAGGAAAGCATCGCACTGGTTGTCTTGTGGGATGCTTAAGAAAATTGCAAAGATGGTGTCTATCATCCATTTTTGATGAGTATCAAAGTTTTGCAGCTGCTAAAGCTAGAGTGTCAGATCAGAGCTTCATAGCATTGTTTGATATTTCTGATTTTAAACCCCAGCCATTGTCATTTTCACCCTCACAAAAGTACAGTATTGACAAAGTCCTGGATGCTGTTCCATCCTACCCCTGA 669 0.4619 MTLDISNGEFLRMASEAPESFTVGIVQPRTSAESGDGNGTGGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPEANLEFLKANGIRLYQFGIDGSKDLLTKDPEDIIREALKVILDVGNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLSSIFDEYQSFAAAKARVSDQSFIALFDISDFKPQPLSFSPSQKYSIDKVLDAVPSYP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5674g00003 222 FunFam probable tyrosine-protein phosphatase At1g05000 45 195 - -
Pral5674g00003 222 PANTHER TYROSINE-PROTEIN PHOSPHATASE 45 195 - -
Pral5674g00003 222 CDD PFA-DSP_Siw14 45 192 - -
Pral5674g00003 222 Gene3D Protein tyrosine phosphatase superfamily 45 195 IPR029021 -
Pral5674g00003 222 Pfam Tyrosine phosphatase family 46 200 IPR004861 -
Pral5674g00003 222 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Pral5674g00003 222 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 202 IPR020422 GO:0006470|GO:0008138
Pral5674g00003 222 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Pral5674g00003 222 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Pral5674g00003 222 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Pral5674g00003 222 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Pral5674g00003 222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 192 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5674g00003 Pral-Chr5674 6566 9566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5674g00003 41 210 Protein tyrosine phosphatase (PTP) family AT4G03960 66.471 5.26e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5674g00003 K18045 - qsa:O6P43_031297 273.478