Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5671g00007 ATGATCCCAAGTCATGGTTGTGTAGAGAAGGGTTCTTCAGATGTCACCGGAAAGGTGGTGGTGGTGGCAGTCAAAGCGTCGAAAGAGATTTCAAGGACTGCTTTAGTCTGGGCTCTGACTCATGTTGTTCAACCCGGGGATTGCATTAAGCTTTTGGTCCTCATTCCGGCTCTCTCCTCAAGTAAAAGGATATGGGGCCTTTCGAGATTTACGACTGATTGTACAACCAGTCACTGGAGATCCCAAACTGCTTCAGATCAGAAGGAAATAGTTGCCAATTCATGTTCTGAATTGATGCTTCAACTCCATGAATTTTATGATCCAGAAAAGATAAAGATCAGAATAAAGATTATCTCTGGTTCTTTATGTGGAGGGGTGGCTGCTGAAGCTAAGAGGGTTCAATCAAGCTGGGTTATATTGGACAAAAAAATGAAACATGAAAAGAAATACTGCATGGAGGAGCTGCGTTGCAATATTGTAGTCATGAAGGGATCTCGGGCAAAGGTTCTTCGTTTGAATTTGATCAGTTCACCGAAGGTGGAACTTGAAGGGGATTTTCCACTGTCACCAGAGCTGAATGAGTATCCAGGAAACTTAAATGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGGTCACCGTTAACCGCAACTGATATTGGAACATCATCAATCTCAAGCTCAGATCCTGGGACATCACCATTTTTCCTCTCCGATATGTATGGGAGACGAAGGAGAGAAACCTTTGTTCATGTCGAAGTTAAAAATCTGGAGGAAAGTGAGTCTGACTCTGAGAGTGAAAAGCTGAGTTCATCATCTAAAAGTTCATATTTTGAGCCATGGGTTGCAAATGTAATGAGAACCGGTGGAGAATTTTCAAAACACAGTGGCAGTATACATCAATCCAGTGATAAGGCTTTGGTGTCTGCCTATGGAACCTTGCTTCAGAAAGTCTCCAACTTGGATCAAGAACCTGGTATCGGATCGCTTCGTTGTAAAATTGACGTGAACTTGAGCAAAAGTGTTAGAGAAGCATTTTCACTGTCAAGGAATGCACCCCTTGGCCCTCCTCCATTGTGCTCCATTTGTCAGCACAAGGCACCATTATTTGGGAATCCTCCAAGGTGGTTTACATATGCTGAACTGCAACTTGCCACCGGGGGGTTTTCACAAGCAAATTTCCTAGCTGAAGGTGGGTTTGGTTCTGTGCACCGTGGTGTCCTACCAGATGGACAGGTTATTGCTGTGAAGCAATATAAATTGGCCAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTCGATGTGTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTAATCGGATTCTGTGTGGAGGAAGGAAGAAGATTGCTAGTTTATGAGTATATCTGCAATGGGTCTTTAGATTCTCATCTTTATGGGCGAAGCAAGAACGTATTGGGATGGTCCGCAAGGCAAAAGATTGCAGTTGGGGCTGCTCGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGTATCGTGCACAGAGATATGCGGCCCAACAATATCCTCCTAACTCATGATTTTGAAGCTCTAGTGGGAGATTTTGGACTTGCAAGATGGCAGCCAGATGGAAATACAGGTGTCGAAACAAGGGTGATTGGAACATTTGGGTATTTGGCCCCAGAATATGCCCAAAGTGGCCAAGTCACTGAAAAGGCTGATGTGTATTCCTTTGGGGTGGTACTGCTGGAACTTGTCACAGGATGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAGTGCCTCACTGAATGGGCACGGCCATTGCTTGAAAGAGATGCCATCTATGAACTTGTTGATCCAAGGTTGATAAACTGCTATATAGATCAAGAGGTTCGTCGCATGATGTTGTGTTGCTCAATGTGTCTACGGCAGGATCCCCATTTTAGGCCTAGAATGTCTCAGGTGCTTCGCATGCTGGAAGATGACATTTCCATGTGA 2031 0.4451 MIPSHGCVEKGSSDVTGKVVVVAVKASKEISRTALVWALTHVVQPGDCIKLLVLIPALSSSKRIWGLSRFTTDCTTSHWRSQTASDQKEIVANSCSELMLQLHEFYDPEKIKIRIKIISGSLCGGVAAEAKRVQSSWVILDKKMKHEKKYCMEELRCNIVVMKGSRAKVLRLNLISSPKVELEGDFPLSPELNEYPGNLNGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDMYGRRRRETFVHVEVKNLEESESDSESEKLSSSSKSSYFEPWVANVMRTGGEFSKHSGSIHQSSDKALVSAYGTLLQKVSNLDQEPGIGSLRCKIDVNLSKSVREAFSLSRNAPLGPPPLCSICQHKAPLFGNPPRWFTYAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVDVLSCAQHRNVVMLIGFCVEEGRRLLVYEYICNGSLDSHLYGRSKNVLGWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGNTGVETRVIGTFGYLAPEYAQSGQVTEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIYELVDPRLINCYIDQEVRRMMLCCSMCLRQDPHFRPRMSQVLRMLEDDISM 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5671g00007 676 PANTHER OS01G0750732 PROTEIN 276 675 - -
Pral5671g00007 676 Gene3D Transferase(Phosphotransferase) domain 1 476 675 - -
Pral5671g00007 676 ProSitePatterns Tyrosine protein kinases specific active-site signature. 521 533 IPR008266 GO:0004672|GO:0006468
Pral5671g00007 676 ProSiteProfiles Protein kinase domain profile. 400 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5671g00007 676 MobiDBLite consensus disorder prediction 212 242 - -
Pral5671g00007 676 SUPERFAMILY Protein kinase-like (PK-like) 380 670 IPR011009 -
Pral5671g00007 676 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 476 676 - -
Pral5671g00007 676 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 372 475 - -
Pral5671g00007 676 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Pral5671g00007 676 MobiDBLite consensus disorder prediction 220 242 - -
Pral5671g00007 676 Pfam Protein tyrosine and serine/threonine kinase 404 669 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5671g00007 Pral-Chr5671 45484 50917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5671g00007 357 666 Trihelix Transcription Factor Family AT1G68690 50.955 3.27e-101 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral5671g00007 PK_Tyr_Ser-Thr 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5671g00007 - - aprc:113855006 1040.8