Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5665g00006 ATGGTGGCTTTTGGCGGGAAAAAGTTGCGCCAAATGGTTTCAGGCTTCGGTGGTAACGGTCTCGGCCAGGTCCTCGCTGCTGTGGCAGTGACCGTCCTTGTCCGCCTCTTCTCTGGTCCCGGTCCCGTGTTGCCCCCAGAAACCGATAATGAGGACCAGGGAGATGGGGCGAATGATGATATTGATGAAGGGGAGAGCGAAGGTCCGGTTTCGGGCAAAGTTTTTCCGGTCACAATCCGGTGGAGCGACATCACCTGCTCTCTTTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTCAAAAATGTGAGCGGAGAAGCGAAGCCTGGAAGATTATTAGCTATAATGGGCCCGTCGGGTTCTGGAAAAACTACATTGCTCAATGTTCTTGCGGGTCAGCTAGCAGCATCTCCCCGGCTGCATCTGTCAGGCCTTTTGGAGTTCAATGGCAGGCCTAGTTCAAAGAGAAGTTATAAGTTTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCGCAGCTCACAGTGCGAGAAACATTGTCGCTTGCTACAGAGCTCCAGCTGCCTGGCATATCTTCCGCGGAAGAGAGGGATGAATATGTGAAAAATCTCTTGTTCAAGCTAGGATTGGTCAGCTGCGCTGATACCATTGTCGGTGATGCCAAAGTTCGGGGAATTAGTGGTGGTGAAAAGAAACGCTTATCTTTGGCGTGTGAGCTTCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCAACTACCGGACTTGATGCCTTTCAGGCTGAGAAAGTGGTGGAAACTCTCCAACACCTTGCACAAGATGGTCATACAGTAATTTGTTCTATTCATCAGCCAAGAGGTTCAGTGTATAACAAATTTGATGACATCGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGCCCTGCGCGTGATGAACCATTGGCATACTTCTCAAAACTTGGGTACCATTGCCCTGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTACAGTTCTACTGAAAGTGTTTATTCCTCTCAGAAGAGAATTGATAGTCTTGTTGAGTCATTTTCTGAAAGACTTTCTACGATAATATATGCAACTCCAATTACCAAAGAAGTGCTTCACAAAAATGGAAAGAGAATTGGGATGAGAACTGTAGCTAAGAAGAAAGGAGGTTGGTGGAAACAGTTCTGGTTGCTCCTCAGGCGAGCATGGATGCAGGCTTCCCGTGATGGACCAACAAACAAAGTTCGAGCAAGGATGTCAATTGCCTCAGCTGTTATTTTTGGTTCGGTTTTCTGGAGAATGGGGAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACTGTTGGGGTGTTTCCAAAGGAGCGGACAATTGTAGATAGAGAACGTGCAAAAGGCTCCTATTCATTGGGTCCTTATCTGTTTTCAAAATTGCTCGCTGAGATTCCTATTGGAGCAGCTTTTCCACTGATGTTTGGTGCTGTTTTGTACCCTATGGCGCGTCTCCATCCTACATTACTGAGATTTGGGAAATTCTGTGGCATAGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGAGCAATGGTTCCAACCACTGAAGCAGCCATGGCAGTTGGCCCCTCTCTTATGACTGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCTGAAAATACTCCAATCATCTTCCGCTGGATTCCTCGCATTTCGCTCATTCGATGGGCTTTTCAGGGACTCTGCATCAATGAATTTAGTGGTCTTCAATTTGAACATCATAATCCATTTGATATTCAAACGGGAGAACAGGCACTGGAGCGCATATCCTTTGGAGGAAGCAAAATTAGGGATACAGTGGTCGCACAAAGCAAGATACTCTTATTTTGGTACTGCACCACCTACCTTCTCCTTGAGAAGAACAAGCCTAAGTACCAGCAACTTGAGCCATCTGCACTCGACCACGACAAATCACACTCAAAACTTGAGGAGCTTAATCCTGAACAAGAAGGTCATCCACTTGAAAATCAACCAGTGAAGCAGGTTGATTCAAATCAACCTGATCCTGTTGGACCTTTCATCTTAGAAGGTGCTGAGTAA 2178 0.4564 MVAFGGKKLRQMVSGFGGNGLGQVLAAVAVTVLVRLFSGPGPVLPPETDNEDQGDGANDDIDEGESEGPVSGKVFPVTIRWSDITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGRPSSKRSYKFAYVRQEDLFFSQLTVRETLSLATELQLPGISSAEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQHLAQDGHTVICSIHQPRGSVYNKFDDIVLLTEGSLVYAGPARDEPLAYFSKLGYHCPDHVNPAEFLADLISIDYSSTESVYSSQKRIDSLVESFSERLSTIIYATPITKEVLHKNGKRIGMRTVAKKKGGWWKQFWLLLRRAWMQASRDGPTNKVRARMSIASAVIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERTIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPRISLIRWAFQGLCINEFSGLQFEHHNPFDIQTGEQALERISFGGSKIRDTVVAQSKILLFWYCTTYLLLEKNKPKYQQLEPSALDHDKSHSKLEELNPEQEGHPLENQPVKQVDSNQPDPVGPFILEGAE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5665g00006 725 MobiDBLite consensus disorder prediction 41 72 - -
Pral5665g00006 725 FunFam ABC transporter G family member 7 77 315 - -
Pral5665g00006 725 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 63 630 - -
Pral5665g00006 725 Gene3D - 76 314 IPR027417 -
Pral5665g00006 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 311 IPR027417 -
Pral5665g00006 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 325 IPR003439 GO:0005524
Pral5665g00006 725 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Pral5665g00006 725 Pfam ABC transporter 100 252 IPR003439 GO:0005524
Pral5665g00006 725 Pfam ABC-2 type transporter 282 339 IPR043926 GO:0140359
Pral5665g00006 725 MobiDBLite consensus disorder prediction 678 696 - -
Pral5665g00006 725 SMART AAA_5 109 302 IPR003593 GO:0016887
Pral5665g00006 725 CDD ABCG_EPDR 76 307 - -
Pral5665g00006 725 MobiDBLite consensus disorder prediction 678 725 - -
Pral5665g00006 725 Pfam ABC-2 type transporter 402 612 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5665g00006 Pral-Chr5665 6018 11847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5665g00006 99 307 Calmodulin-binding Proteins AT2G36910 26.484 1.27e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5665g00006 K05681 - gmx:100788256 1172.92