Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5662g00004 ATGGGTTTCATTTTATTTCACTCGTTCAAAAGGAATAAGAAATCCATAAGTGAGACAAGAGAAGCAAAAAATGGGGATTTGTTTTCCATATGGAATTATGATGGAAACATTGCATATAAAGATATCATTGAAGCAACGGAAGATTTTGATATCAAATATTGTATTGGAACTGGTGCCTACGGAAGTGTTTATAGAGCACAGCTTCCTAGTGGCAAAATTGTAGCATTGAAAAAACTCCACAGAAGAGAATATGAAAACACATATTTTTCTAAGAGTTTTCATAATGAAGTGAAGATGTTAAGTGAAATTCGACATCGCAATATCATAAAGCTTCATGGTTTTTGTTTACATAATCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGTAGCCTTTTTTATGTGTTGAATAATGATGACGAAGCTAAAGAGGTTGATTGGAGTAAGAGAGTAAATGCCATCAAAGGAATAGCAAATTCTTTGTTCTACCTTCATCATGAATGTGTTCCTGTAATTATCCATCGAGACATAACAACTAGTAATGTGTTATTGAACTCAAAGATGGAGGCATTTCTATCTGACTTTGGCACAGCTAGAATCATTGATCCAAATACATCTAATCAAACTCTTCTAGTTGGTACTTATGGTTATATTGCTCCAGAGCTTGCATACACTGTAGTTGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGACAATGGAAACAATCATGGGAAAACATCCTGGAGATTTGATATCATCTTTGTCAAAGACATATTCTAAAAGCATTTGGCTAAAAGATGTGTTAGACCCACGTATCCCACAGCCATCGCGGAAAGATGCACGAGATGTGACTCTTTTGGTCACAATAGCATTAGCATGCTTGAATCCATCTCCCCAGTGTCGGCCATCGATGCAGCAAGTGTCTCAAAGGTTTTTATCCTCCAACATGCCATTACCCATTCCTTTCAATGATATAACGATCCAGCAGTTAATGAATCAATATGTGCAAATAATGTAG 1029 0.3576 MGFILFHSFKRNKKSISETREAKNGDLFSIWNYDGNIAYKDIIEATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHRREYENTYFSKSFHNEVKMLSEIRHRNIIKLHGFCLHNQCMFLIYEYMERGSLFYVLNNDDEAKEVDWSKRVNAIKGIANSLFYLHHECVPVIIHRDITTSNVLLNSKMEAFLSDFGTARIIDPNTSNQTLLVGTYGYIAPELAYTVVVTEKCDVYSFGVVTMETIMGKHPGDLISSLSKTYSKSIWLKDVLDPRIPQPSRKDARDVTLLVTIALACLNPSPQCRPSMQQVSQRFLSSNMPLPIPFNDITIQQLMNQYVQIM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5662g00004 342 Pfam Protein kinase domain 53 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5662g00004 342 SUPERFAMILY Protein kinase-like (PK-like) 32 314 IPR011009 -
Pral5662g00004 342 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Pral5662g00004 342 Gene3D Phosphorylase Kinase; domain 1 9 127 - -
Pral5662g00004 342 ProSiteProfiles Protein kinase domain profile. 49 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5662g00004 342 ProSitePatterns Tyrosine protein kinases specific active-site signature. 173 185 IPR008266 GO:0004672|GO:0006468
Pral5662g00004 342 PANTHER LEUCINE RICH REPEAT KINASE 2 6 319 - -
Pral5662g00004 342 FunFam MDIS1-interacting receptor like kinase 2 128 321 - -
Pral5662g00004 342 Gene3D Transferase(Phosphotransferase) domain 1 128 321 - -
Pral5662g00004 342 FunFam Leucine-rich repeat receptor protein kinase MSP1 11 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5662g00004 Pral-Chr5662 50674 51817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5662g00004 5 221 Receptor kinase-like Gene Family AT4G08850 49.774 1.38e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5662g00004 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5662g00004 - - pcin:129297054 546.969