Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5659g00019 ATGTCAACGGAGCGGCTGATTGAACCTTCCCATGCAATGTCAGAAGCATTGCCGACTTATCAGTCGTTGAGGCAATGCGGCGAGCCTAGTTGGATATTTGAAGAATTGCCGAAGGCCACCATTGTTTCCGTTTCCAGACCAGACACCGCAGATATTAGTCCAATCCTTCTCTCTTACACCATTGAGTTGGAGTACAAACAGTTCAAATGGCGCTTAAGGAAGAGAGCATCACAAGTTCTCTACTTACATTTTGCTTTGAAGAAACGTGCATTAATTGAAGAATTTCATGACAAGCAGGGGCAGGTAAAAGAATGGCTGCAAAGCTTAGGAATAGTTGATCCAACGGCGATGGTGCAAGATACTGAAGAACCTGACGATGGGGCTGTGCCTTTACATCATGAAGACAGTATAAGGAGCAGATATGTACCATCCGCGGCAGCCCTACCAATCATTCGGCCATCACTGGGAGGGCAGCAGTCAGTTGCAGATAAAGCAAAAGTCGCAATGCAGGGTTACTTGAATCATTTCCTTGGAAACTTGGATATTGTCAATTCTCGAGAGGTCTGCAAGTTCTTGGAGGTCTCTAGGTTATCCTTTTTACAGGACTATGGGTCAAAAATGAAAGAGGGCTATGTAATGGTGAAGGGCTTATCAAATATCTCAAGGGATTCAGATGTAACATGCTTTCCATGCGAATGGCTGGGTTTGTGCAATAACAACTGGTCCAAGGTGTGGGCTGTCCTGAAACCTGGCTTTTTGGCCTTGCTGGATGACCCTTTCAGCAACAAACCGGTAGATGTAATTGTTTTTGATATCCTTCCTTCATCCAGTGAAGATAAGGTTTCTCCTATACATTTGGCTGATCAACTCAAGGAACGCAATCCCTTAAGATACACATTTAAGGTAACTAGCGGAAATCGGAGCATAAGGTTGAGAACTAGCAGCAGTGCCAAAGTTAAAGAATGGGTTACTAAAATTAACGAAGCTGGCCTTGGACCTCACGAGGGTTGGTGTCGTTCTCATCGCTTTGGTTCATTTTCTCCCATAAGAGGTTTGACTGAAGATGGAAGCCAAGCCCAGTGGTTCATCGATGGTAAGGCAGCTTTTGAAGCAATTGCTTCCTCAATTCAGGAAGCAAAGTCAGAGATCCTTATCACTGGATGGTGGCTTTGCCCAGAGCTCTATCTGAAACGTCCTTTTCACTCTCATTCTTCCTTTAGGCTGGACGCATTACTGGAAAAAAAGGCTAAACAAGGAGTTAAGATCTATGTGCTTCTGTACAAGGAGGTCTCTTTAGCTTTAAAAATCAACAGCTTGTACAGTAAGAGAAGACTTCTCAACATTCATGAAAATGTGAGAGTATTGCGGTATCCCAACCATTTATCGACTGGTGTCTACTTATGGTCGCACCATGAAAAACTTGTAATCGTTGATTACAAGATTTGCTATTTTGGAGGACTAGATTTATGCTTTGGCCGTTATGACACACCTGAACATAAAGTGGGTGATTTCCCCTCCGAAATATGGCCCGGAAAGGACTATTACAACCCAAGAGAATCTGAACCTAATTCATGGGAAGACACCATGAGAGATGAACTGGATCGTGTAAAGTATCCCCGCATGCCGTGGCACGATGTCCATTGTTCTATTTGGGGACCTCCCTGCCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACATACCATTCCGCTACTTATGCCACACCATCACATGGTCATCCCTCACTACATGGGAAGAAGCAAAGAGATAGATATCGATGGATTCAAAGAAGATGACAAGAAAGAAGTTGAAAGTCAGAATTCCTCTTCGTCACAATCACCTCCGCAAGATATACCATTGCTTTTGCCTCAAGAAGCTGGTGGAGAAGATATTAAGTTAATTGGGAACAATGCGAATTATAATCTCACGGATCAGACAAATTTTTGGGAAAGCCGAAATCCAGGCGACGAAACTTCAGATGCTCAGGTGGAAGGTTTCCTAAATGACTTTGATCCTTTTAACTTGGAGAGACAATCTCCCATGGATGCTTCAGATGATTGGTGGCAGACACCTGAAGAAGGTTATTGTGATGCCACTGCTCTGGAATGCGGAGAAGTTGGTCCTCGTACTAAATGTCGTTGTCAGGTAATCAGGAGTGTCAGCCATTGGTCTGCTGGAACCAGCCAGACGGAAGAAAGCATTCACACTGCTTATTGTTCTCTCATTGAAGAAGCGAAACATTTTATCTACATTGAGAATCAGTTTTTCATATCAGGCCTGGCAACTGATGATACCATACAGAACCGTGTATTGGAAGCATTATATAGGCGGATTTTGCTGGCTCACAAAGAGCAAAAGCTTTTTAGAGTTATTATTGTGATGCCTCTATTGCCTGGCTTCCAGGGTGGTCTGGATGATGGTGGGGCAGCAACTGTGAGAGCCATAACACATTGGCAGTATCGAACAATCTCTAGAGAAAAACACTCCATATTAGCTAACCTTAAAGCTGCGCTTGGCCCTAAGACTGAAGATTACATTTCTTTCTACGGTCTGCGTTCTCATGGTAGACTTTCTGCTGATGGCCCTATGCTTACAAGGCAGGTCTATGTACACAGCAAATTAATGATCGTAGATGACCGTGTTGCTATAATTGGGTCTTCTAATATAAATGATAGGAGTTTGTTAGGTTCAAGGGACTCTGAGATTGGAGTGGTAATCGAAGACAAAGAGTATGTCGATTCATCTATGGATGGAAAGCCATGGAAAGCTGGGAAATTTTCCTATAGCCTCCGTTGCTCCTTATGGTCTGAGCACCTCGGTCTACCTACTGGAGAGATAAATAAAATCAGTGATCCAGTAGCAGATACAACTTACAAGGACTTATGGTCAGCAACTGCGAAGGAAAATACCAGCATATACCATGAGGTCTTTTCCTGCATACCCAATGATCACATACACTCCAGAGCTGCACTTAGGCAAAACATGACTCACTTAAAGGACAAACTCGGTCATACCACTATAGACTTGGGAATAGGCCCTGATCAAACAGAGCACGCAGGCAGACTGAAGTGCATAAAGGGGCATCTTGTTTGTTTTCCTTTGGAATTCATGCGCGGAGAAGATTTAAGGCCAGTTTTCAATGAGAGTGAGTTTTACGTATCGCCTCATGTATATCATTAA 3213 0.4351 MSTERLIEPSHAMSEALPTYQSLRQCGEPSWIFEELPKATIVSVSRPDTADISPILLSYTIELEYKQFKWRLRKRASQVLYLHFALKKRALIEEFHDKQGQVKEWLQSLGIVDPTAMVQDTEEPDDGAVPLHHEDSIRSRYVPSAAALPIIRPSLGGQQSVADKAKVAMQGYLNHFLGNLDIVNSREVCKFLEVSRLSFLQDYGSKMKEGYVMVKGLSNISRDSDVTCFPCEWLGLCNNNWSKVWAVLKPGFLALLDDPFSNKPVDVIVFDILPSSSEDKVSPIHLADQLKERNPLRYTFKVTSGNRSIRLRTSSSAKVKEWVTKINEAGLGPHEGWCRSHRFGSFSPIRGLTEDGSQAQWFIDGKAAFEAIASSIQEAKSEILITGWWLCPELYLKRPFHSHSSFRLDALLEKKAKQGVKIYVLLYKEVSLALKINSLYSKRRLLNIHENVRVLRYPNHLSTGVYLWSHHEKLVIVDYKICYFGGLDLCFGRYDTPEHKVGDFPSEIWPGKDYYNPRESEPNSWEDTMRDELDRVKYPRMPWHDVHCSIWGPPCRDIARHFVQRWNHAKRTKAPNEHTIPLLMPHHHMVIPHYMGRSKEIDIDGFKEDDKKEVESQNSSSSQSPPQDIPLLLPQEAGGEDIKLIGNNANYNLTDQTNFWESRNPGDETSDAQVEGFLNDFDPFNLERQSPMDASDDWWQTPEEGYCDATALECGEVGPRTKCRCQVIRSVSHWSAGTSQTEESIHTAYCSLIEEAKHFIYIENQFFISGLATDDTIQNRVLEALYRRILLAHKEQKLFRVIIVMPLLPGFQGGLDDGGAATVRAITHWQYRTISREKHSILANLKAALGPKTEDYISFYGLRSHGRLSADGPMLTRQVYVHSKLMIVDDRVAIIGSSNINDRSLLGSRDSEIGVVIEDKEYVDSSMDGKPWKAGKFSYSLRCSLWSEHLGLPTGEINKISDPVADTTYKDLWSATAKENTSIYHEVFSCIPNDHIHSRAALRQNMTHLKDKLGHTTIDLGIGPDQTEHAGRLKCIKGHLVCFPLEFMRGEDLRPVFNESEFYVSPHVYH 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5659g00019 1070 MobiDBLite consensus disorder prediction 609 633 - -
Pral5659g00019 1070 SUPERFAMILY PH domain-like 207 329 - -
Pral5659g00019 1070 Pfam PH domain 208 329 IPR001849 -
Pral5659g00019 1070 ProSiteProfiles PH domain profile. 205 331 IPR001849 -
Pral5659g00019 1070 SMART PH_update 206 333 IPR001849 -
Pral5659g00019 1070 Pfam PLD-like domain 750 923 IPR025202 -
Pral5659g00019 1070 Gene3D - 201 330 IPR011993 -
Pral5659g00019 1070 FunFam Phospholipase 711 931 - -
Pral5659g00019 1070 CDD PLDc_vPLD1_2_yPLD_like_1 359 503 - -
Pral5659g00019 1070 Gene3D Endonuclease Chain A 704 940 - -
Pral5659g00019 1070 Gene3D Endonuclease Chain A 353 589 - -
Pral5659g00019 1070 CDD PH_PLD 183 329 - -
Pral5659g00019 1070 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 466 493 IPR001736 GO:0003824
Pral5659g00019 1070 SUPERFAMILY Phospholipase D/nuclease 328 586 - -
Pral5659g00019 1070 SMART pld_4 877 904 IPR001736 GO:0003824
Pral5659g00019 1070 SMART pld_4 466 493 IPR001736 GO:0003824
Pral5659g00019 1070 Pfam Phospholipase D Active site motif 466 493 IPR001736 GO:0003824
Pral5659g00019 1070 PANTHER PHOSPHOLIPASE D 164 1058 IPR015679 -
Pral5659g00019 1070 SUPERFAMILY Phospholipase D/nuclease 717 925 - -
Pral5659g00019 1070 PIRSF PLD_euk 607 1070 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pral5659g00019 1070 PIRSF PLD_euk 11 624 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pral5659g00019 1070 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 877 904 IPR001736 GO:0003824
Pral5659g00019 1070 CDD PLDc_vPLD1_2_yPLD_like_2 737 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5659g00019 Pral-Chr5659 81272 88969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5659g00019 32 1070 Phospholipase D Gene Family (Wang group) AT3G05630 67.484 0.0 1435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5659g00019 K01115 - gmx:100796914 1690.24