Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5659g00017 ATGGGGCACTTATCGTCCATGTTCAATGGGCTGGCAAGGTCGTTCTCAATAAAGAAAGGGAAGAGTTCTCGGAAATGCGATGGTAGAGAAGCTGCCGAAGCAATGGCCAAGGAAGCTAAGAAAAATGACCAGATTCTCCGCACTTCTGGCACCGTTCATGTCCAGGGTTCCAATAACTTCGCCTCAGTTTTTTCCAAGAAAGGGCAGAAAGGAGTCAACCAGGATTGTTCCATAGTGTGGGAGGAGTTTGGATGTCAAGAAGACATGATGTTCTGTGGAATATTTGACGGCCACGGACCATGGGGTCACTTCGTGGCTAAGAAAGTAAGAGAGGCAATGGCTCCATCTTTGTTGTGTAACTGGCAGGAGACGCTTGCGCAGACCTCGCTTGATCCTGACTTCGACTTAGAGGATGAGAAAAAGCAACATCCTTTCAACATATGGAAGCACTCCTACTTGAAGACTTGTGCCGCCATTGATCAAGAGTTAGGGCGCTCGCGCAAAATCGATTCTTTCTACAGCGGAACGACGGCCCTCTCCATTGTTCGCCAGGGTGAACTAATCGTTGTGGCAAATGTTGGTGACTCTCGGGCTGTATTAGCCACAACGTCAGATGATAATAGCTTAGTGCCAGTACAACTGACTGTTGATTTCAAGCCCAATCTGCCTGAGGAGGCAGAGCGCATAATTCAGTGTCAGGGACGAGTGTTCTGCTTAGAGGACGAACCAGGAGTTCACAGAGTGTGGCTACCGGACGGAGAGTCGCCGGGATTGGCCATGTCCAGAGCGTTCGGAGACCACTGCGTGAAGGAGTATGGTCTGATTTCTGTTCCTGAGGTAACACACAGGACTATCAGCAGCAGAGACCAATTCGTCGTGCTAGCAACAGACGGGGTGTGGGATGTGATATCGAATGAAGAAGCGGTGCAAATAGTGGCTTCAACAGAAGACAGAGGGAAGGCAGCGAGGAGATTGGTGGAGTGTGCGGTGGGGGCTTGGAAGCGCAAACGAAGGGGCATTGCCATGGATGATATTTCCGCAATATGTGTATTCTTGCACCCTCCTCCTCCTTCTCTCCTAAAGTAG 1086 0.5009 MGHLSSMFNGLARSFSIKKGKSSRKCDGREAAEAMAKEAKKNDQILRTSGTVHVQGSNNFASVFSKKGQKGVNQDCSIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKKVREAMAPSLLCNWQETLAQTSLDPDFDLEDEKKQHPFNIWKHSYLKTCAAIDQELGRSRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDDNSLVPVQLTVDFKPNLPEEAERIIQCQGRVFCLEDEPGVHRVWLPDGESPGLAMSRAFGDHCVKEYGLISVPEVTHRTISSRDQFVVLATDGVWDVISNEEAVQIVASTEDRGKAARRLVECAVGAWKRKRRGIAMDDISAICVFLHPPPPSLLK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5659g00017 361 SMART PP2C_4 51 350 IPR001932 -
Pral5659g00017 361 SUPERFAMILY PP2C-like 50 355 IPR036457 -
Pral5659g00017 361 Gene3D - 29 353 IPR036457 -
Pral5659g00017 361 PANTHER PROTEIN PHOSPHATASE 38 350 IPR015655 GO:0004722|GO:0006470
Pral5659g00017 361 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Pral5659g00017 361 CDD PP2Cc 59 352 IPR001932 -
Pral5659g00017 361 FunFam Probable protein phosphatase 2C 34 51 354 - -
Pral5659g00017 361 Pfam Protein phosphatase 2C 84 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5659g00017 Pral-Chr5659 73229 75908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5659g00017 1 353 PP2C-type Phosphatase Gene Family AT3G05640 70.423 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5659g00017 - - gmx:100808955 615.535