Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5659g00004 ATGGCACCATGGAAAAGGCCACCTCACTTGGTGGATCGTGACCGGGATGGTGAAGCTCCCGGTAACAAGTCTAAGAGGAGGCAAGGCGCCTCCGTGGCCGCTCCGGCACAGATTGGCGTTACTCGTGGTAATGGTTTACTCAAAGAAGATGATAAGTTGGTGGAAAAGATTTTTGGGCCTATGATTCGCAGAGTGGTGGGAGAAGAACTCGCAACTGCACTGCGACGGCACCTTCACCGAGGGCCAAGTCCAAGCGGACACAGAAAGAAAACATTACAACTGCGTTTGAAGGGATCGCCCAGCGATACTTATACAGGCGTTAAGGTTGAGGCCAAGAAAGCAGCTTCACTTGAAGTTGCTCTGTATCAGTGTGATGCTGCTGGAGTTGAGGACCGCATAGTCACAGAAGGTCCTCTATCCTCCACAGGGATAGAGTTGTGCCTTTTACACGGTAGCTTCGGTTCCGATGGTCGCGAGGATTGGAGCTCCGAGGATTTCCGTCGCAACATAGTACATCTAACAAGGAAGGGAGGGAAATTGCTCTCTGGAAATCTGTTCCTAAGACTAAGAAATGGAGTTTGCACTGTGGAGAACCTTTGTGTCAATGATATATCCACATGGGCTAGAACTGAACATTTCAGGTTAGGCGCCAAAGTCGCAGAACCAACTCCAGAAACAGAGAGCATCAGGGAGGGTATAAGTAAACCTTTTAGGGTCAAGGATTGTCGTGGACTGGGCTACCAGAAACCTGACACTCCATCGTTAAATGATGGGATTTGGCGTTTAAAAGGCATAAGAAAAGATGGGAAAAGACATAAATTGCTGCAATCCAAAGGAATAAACACTGTCGAGGCTTTCTTGCATCAGTTTAATACCGACCCAAATCAACTGAAACAGGAGATTAGAGTTGGAGAGAAGGCATGGAGAAAGCTTATCCTCCATGCTAATGAAGCATGTCCCAAACAAGATGCCGGGCAACCGTATCTTCCCACAGCTCCTCTTAACTCGGAGCCACAGCAAGCTGGGCAGGGCCAGCCACAACATGAACTTCTACTACCTGTTACTCCCCAGGGCTGGCCGTCCACCTCTCAGTGGCATTCAGGTGAAGCGGTGCATGCTGGACAACAAGGCGAAGTGAGTCATGGAGGGGGTGACATTGAGAGCTGGGTGACCGAGCTACTGAACCCCCCTCCTGCTCATGAAGGACATAGCGGCGAGCAGTTTTCGTGGCCCAATTCTGGTATATACATATCAAACAGAGGCGGTGGCACAACAATTTGGAGACAGATTCGAAGTGCTGTCAAGGCCACTTGGACTTGGCTGCGTTTTTGTCGAGCCAAAAGAAAGGGAAAGCTTGTCCCCCGTAACTATAAAATCTACTCCCCGGTATTGTCCTTGATTTCTCTATCCAGGCATGCGGACAAAAAAAATTTGACCTCAAATTCTTAA 1449 0.49 MAPWKRPPHLVDRDRDGEAPGNKSKRRQGASVAAPAQIGVTRGNGLLKEDDKLVEKIFGPMIRRVVGEELATALRRHLHRGPSPSGHRKKTLQLRLKGSPSDTYTGVKVEAKKAASLEVALYQCDAAGVEDRIVTEGPLSSTGIELCLLHGSFGSDGREDWSSEDFRRNIVHLTRKGGKLLSGNLFLRLRNGVCTVENLCVNDISTWARTEHFRLGAKVAEPTPETESIREGISKPFRVKDCRGLGYQKPDTPSLNDGIWRLKGIRKDGKRHKLLQSKGINTVEAFLHQFNTDPNQLKQEIRVGEKAWRKLILHANEACPKQDAGQPYLPTAPLNSEPQQAGQGQPQHELLLPVTPQGWPSTSQWHSGEAVHAGQQGEVSHGGGDIESWVTELLNPPPAHEGHSGEQFSWPNSGIYISNRGGGTTIWRQIRSAVKATWTWLRFCRAKRKGKLVPRNYKIYSPVLSLISLSRHADKKNLTSNS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5659g00004 482 PANTHER OS02G0177800 PROTEIN 37 323 IPR012416 GO:0005516
Pral5659g00004 482 MobiDBLite consensus disorder prediction 1 36 - -
Pral5659g00004 482 MobiDBLite consensus disorder prediction 7 23 - -
Pral5659g00004 482 Pfam Calmodulin binding protein central domain 254 317 IPR046830 -
Pral5659g00004 482 Pfam Calmodulin binding protein-like N-terminal domain 99 241 IPR046831 -
Pral5659g00004 482 MobiDBLite consensus disorder prediction 321 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5659g00004 Pral-Chr5659 12956 18737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5659g00004 60 315 Calmodulin-binding Proteins AT5G57580 37.313 1.96e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5659g00004 - - pcin:129307776 407.912