Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5658g00012 ATGGAGATCGAGAAAAGACGTTCCAAGGGAAGCTTCCTCAGTTTTTTTTATTGTAATGGAGTATCTCGAAAGAAGCTGTTCCGTGCCAGTCCTTGCTTGCCTGGTAATCATGTGCCACCATCTATACTGTTAATTAGTCAATCTCCCAGCTTGCCTCGTCCACCTATTCAGTCCTGTTCGAAACATAAGCTGTTCTCTTCCAAGAGTGCTATCCATGTTTATTCTAAATATTTCTGGTTAATTTTAATTAATCGTACAGACGGATTGAAGCAAGCGAAGGAAAATGTGGGGAACATGCCAGAATCACAATTGAATACGGCAAAGGTTGGTGAGAATGATATAAATCCAAGCGGTACAGCAAAATGCGATTTCAACTGTGAGCTGTCAGCTAGTATTGATAAGGGATGTGAAACCAAGGCGCCGTGCTTAGTAGCGAGACTAATGGGTTTGGATTCATTGCCCACTTCAACAGTCAATAAGCTCTCTTTTATTGCATCGCGTTCCTCTAAATCTCTCGTATCTTCTCGCTGTCATGAGAATGATGTCTACCCCATGAGATCCGGGGCACATGAAACGGAAAACAGGACAATTGAAACAAGACAGCCAAAGAATGCAGCTACAAGAGTTCTTGATTTCAAGCAGAAATCAGAAGCTGCACATCAAGCATCCATGCAAGAAAAGATTATGGATACAAATACTGTCAAGGGTTCAAGATACTCAGAAAACATTGGTTCTCACTGTAATTGGAGTAGAGGAAAATCAACCTTACTTGCAATACAAGCTAAGGCCGAGGGTCAATGCGGAGGTACTTTAACTTCAAATGGTAACAGGGCACATGAGCAGAAAGAACAGAGTGAGATTGCATCCAACCAGTTCTTCAGGACACAGAAACCAATTTTACAGCAGGCTATGAAGCAGAGAACATGTAAGAGTCGTAGTAGCCATTACAAAGAGCGTGGGCAGAATATGCAAATGCAGAATAGTGCTACCGTTAAAGTCAGATCAACTTCAATAGTCGAACCCAACAAGCCAACCGCACGAAGTTCCACTTGTGGAGCGAGGAAAGTGACAAACAAGAATTTTGTATTTGGCAATGTTAAACCCAAGAGTTCTGGCAGAAGAGCAACTGGTGCCAAAGAGGGGTTTTCACCGATCAAGACGAAGAGTAATTCCATGAGGAAAAGATATCCCAGAAGGGATGTTCTTTCTGCCAATGTTGTTAATAGTTGTGAAGTTAAGTCCATAAAATGCAATATAACAACAGACGGAAGTATGAATCAGGATACATTAAACAAGGAACCTGGCAAGGATGTTGTTTCCTTCACGTTTACATCTCCTTTGAAGAAAGAGTCACAACCTTCGACTCATACGAACAACGTTGGTGTCATTGCTCCTGGCTTACATTTGACATATGGTGATGCTTCAAGTGAACTGTTCGATGGAAAGACGCAAGATTTGGCATCTAGAATCAACTCACCCGAGTGCAATCTGGCTACTAGGGTGTCTTCGGCTGTTTTATTACGCAGTGAAGTTGGCATCGGATCTGGGGAAGGAGACAGGAGTTTTGCCTCTGATCCGCCTGGTGGTGATCTGCAGGGCATGCATAACTGTGGTTGTTCTTCAAACGGTGATCTGATGCTTAACATGAATCAGCAGCTGCAGCGATCCAAAGCAATACGACAACATAGCAGCGACAACAACATTGAAATTGAGTACAGTCAAGGTCTGAATTCTGGTTTGGTCAGTCAAGCTGCCGAACAAGATCAAACAATCAGAAGTGAACAGGTCAAAAAGACAATTGTGTTTGACGTGTTGGAGAAATGGAGCAGTGGAACAGAAAGCGATGGGGACGAGCACTTGAAGGTGGAGAGGAATCTTTTGTTTGACTTTGTGAGCGAGTTCCTGGAGCTCAGAAGAAGCAGAAGGGACAAGGGAAGGGCCCTGGAGAGTCAGATTTGGTGGGAAGAAGACTTGTGCAGAGAAATGAAACGATTCAAAAGCATGCAAGAGAGCATGGTGGATGAGCTTGTGAACATGGACATGAGCTCTCCACATGGCACGTGGCTTCATTTTCAGACTGAACCCTTCCATCAGATTTTACTTTCAGAGATTGAGTGGGACATCTCAACTTCTCTCATCAATGATTTGCTTCTTGAATTGCTGCATCATTAG 2172 0.4328 MEIEKRRSKGSFLSFFYCNGVSRKKLFRASPCLPGNHVPPSILLISQSPSLPRPPIQSCSKHKLFSSKSAIHVYSKYFWLILINRTDGLKQAKENVGNMPESQLNTAKVGENDINPSGTAKCDFNCELSASIDKGCETKAPCLVARLMGLDSLPTSTVNKLSFIASRSSKSLVSSRCHENDVYPMRSGAHETENRTIETRQPKNAATRVLDFKQKSEAAHQASMQEKIMDTNTVKGSRYSENIGSHCNWSRGKSTLLAIQAKAEGQCGGTLTSNGNRAHEQKEQSEIASNQFFRTQKPILQQAMKQRTCKSRSSHYKERGQNMQMQNSATVKVRSTSIVEPNKPTARSSTCGARKVTNKNFVFGNVKPKSSGRRATGAKEGFSPIKTKSNSMRKRYPRRDVLSANVVNSCEVKSIKCNITTDGSMNQDTLNKEPGKDVVSFTFTSPLKKESQPSTHTNNVGVIAPGLHLTYGDASSELFDGKTQDLASRINSPECNLATRVSSAVLLRSEVGIGSGEGDRSFASDPPGGDLQGMHNCGCSSNGDLMLNMNQQLQRSKAIRQHSSDNNIEIEYSQGLNSGLVSQAAEQDQTIRSEQVKKTIVFDVLEKWSSGTESDGDEHLKVERNLLFDFVSEFLELRRSRRDKGRALESQIWWEEDLCREMKRFKSMQESMVDELVNMDMSSPHGTWLHFQTEPFHQILLSEIEWDISTSLINDLLLELLHH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5658g00012 723 Pfam Domain of unknown function (DUF4378) 594 714 IPR025486 -
Pral5658g00012 723 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 577 718 - -
Pral5658g00012 723 MobiDBLite consensus disorder prediction 318 351 - -
Pral5658g00012 723 MobiDBLite consensus disorder prediction 315 351 - -
Pral5658g00012 723 MobiDBLite consensus disorder prediction 515 535 - -
Pral5658g00012 723 MobiDBLite consensus disorder prediction 364 394 - -
Pral5658g00012 723 Pfam DUF761-associated sequence motif 130 158 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5658g00012 Pral-Chr5658 34216 36968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5658g00012 621 721 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 38.739 2.12e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5658g00012 - - pcin:129314340 861.677