Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5657g00056 ATGGTGAGCCAGGAAGATTTGTTGATTGGAAAGATCTGCGAGCTCTATGATCAGATCTCGAGCCTCGATAGTCTCAAACCCTGCCAAAATGTCGACACTCTTTTTACCCAACTCGTCCTCACATGCATACCACCCAACCCTATCGATGTCACTAAGCTCCCCAAAAGCCTTCAGCAGATTCGGTCCAAGCTCATTCGCCTCTGTGGCGACGCCGAAGGCCTCCTGGAGACCCACTATTCCACCATCCTCGGCTCCTTCGAAAACCCTCTCGACCACCTCGACATCTTCCCTTATTACTCCAACTACCTCAAACTCGGTCTCCTCGAGTTCACCATCCTAACCCAGCACTGCGCTCGTTTCCCTTCCAACATAGCCTTCGTCGGCTCTGGCCCTCTTCCTTTCACTTCGATTGTGCTGGCCTCCAATCATCTTCCCACCACCACCTTCCATAACTATGACATCGACCCGCAGGCCAATTCCATGGCCCTTCGCTTGTTTTCTTCCGACACTGATTTATCTAAACGCATGGTTTTTCACACCAGCGATATCTTGGACGTGACCAAGGACTTGGAAGAGTACGAGGTTGTTTATTTGGCGGCTCTCGTGGGGATGGACAATGACGAGAAGAATCGGGTGATCGATCATTTGGCTAAGCATATGGCTCCGGGAGCACTCCTGATGCTGAGGAGTGCCCATGGAGCTCGCGCTTTTCTGTATCCTGTGGTTGAGCCCGACGATCTTCGAGGCTTTGAGGTTCTCTCTGTGTTCCATCCCACCGATGAGGTTATCAATTCTGTTGTGATCGCGCGGAAGTATCCCCTGCCTCTGCATTCGCATAATGATCAGCAAGGTCTTCCAAATATGATATTGCCAAACAAGTGTTCTGAGATACAAGTGTTTAATCCCCTCGTCAACCATGGGAATATGATTGAGGAGTTGACCGTCGAGGAACAGCCATCGTAA 963 0.5057 MVSQEDLLIGKICELYDQISSLDSLKPCQNVDTLFTQLVLTCIPPNPIDVTKLPKSLQQIRSKLIRLCGDAEGLLETHYSTILGSFENPLDHLDIFPYYSNYLKLGLLEFTILTQHCARFPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPQANSMALRLFSSDTDLSKRMVFHTSDILDVTKDLEEYEVVYLAALVGMDNDEKNRVIDHLAKHMAPGALLMLRSAHGARAFLYPVVEPDDLRGFEVLSVFHPTDEVINSVVIARKYPLPLHSHNDQQGLPNMILPNKCSEIQVFNPLVNHGNMIEELTVEEQPS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5657g00056 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pral5657g00056 320 Pfam Nicotianamine synthase protein 4 272 IPR004298 GO:0030410|GO:0030418
Pral5657g00056 320 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Pral5657g00056 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 232 IPR029063 -
Pral5657g00056 320 PANTHER NICOTIANAMINE SYNTHASE 3 4 313 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5657g00056 Pral-Chr5657 270275 271783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5657g00056 4 314 Nicotianamine Synthase Gene Family AT1G56430 60.692 7.89e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5657g00056 K05953 - gmx:100794250 500.36