Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5657g00049 ATGGCGATTTTGCAGCCCGACTTAGATTCTATTCATTCCGATCCGTTGCCACCATCCAGTCTTAAACGGCCCACCGATTTTGGGGCCGATCCTAGCCATCAAAGTTCTCTCCACCCCGTACGGTGGAGATCCGACACGGAGCGCCGGATCTACTCATCCAAGCTCGTCGAAGCTCTGCGCCATGTCCTCCGCCGCAGTCCTTCTCTCCCGCCCAAACCTAGCGGCGGTCGTGAAATTCGTGAGACGGCTTATAGAGTTCTAGCCACGACGGCCAAGGGGAGAACTCGATGGAGTCGAGCGATTCTGGCCTCTCCGCTCGGCCGTTGGAGATTCCAGAGGCAACACAAGAAGGTGAAGAAGATGACAAGAGGATTGAAGAAGCCGGAGATTAGGAAAGAGAGAAAGAGGTTGCCTGCTTTGCAGAAGAAAGCGCGCGCTTTAGGCCGATTAGTTCCTGGTTGCCGTAAGGTCTCCTTTCCAAATCTTCTGGAAGAAACCACTGATTATATACCGGCGTTGGAGATGCAAGTTCGAGTAATGACGGCACTCACCGAACTGCTTACCGGTAGTAGCGCACCGGCCGATCGAATCGAGGGGCCTCGACCGTAA 609 0.5452 MAILQPDLDSIHSDPLPPSSLKRPTDFGADPSHQSSLHPVRWRSDTERRIYSSKLVEALRHVLRRSPSLPPKPSGGREIRETAYRVLATTAKGRTRWSRAILASPLGRWRFQRQHKKVKKMTRGLKKPEIRKERKRLPALQKKARALGRLVPGCRKVSFPNLLEETTDYIPALEMQVRVMTALTELLTGSSAPADRIEGPRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5657g00049 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 189 IPR036638 GO:0046983
Pral5657g00049 202 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Pral5657g00049 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Pral5657g00049 202 MobiDBLite consensus disorder prediction 1 43 - -
Pral5657g00049 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 187 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5657g00049 Pral-Chr5657 214019 215139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5657g00049 41 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.336 1.53e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5657g00049 - - pcin:129310330 329.717