Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5657g00039 ATGGCGAGTGGATTCCTTCCATTTCTGGCGATGGCTTTCGTGCAGCTGGGGTACGCAGGCATGAACATCATTTCAAAGCTTGCAATGCAATCTGGCATGAACCCTATCGTCCTCGCCGCTTATCGCCAAATCTTCGCCACGCTCGCCATTGCTCCCTTTGCTTACTTCTTCGAACGCAAAACGGTCCCCAAGTTGACCAGGCCCATTGTGTTCCAGATATTGCTTTCTTCCTTAACTGGGGTAACTGGAAACCAAGTATTTTTCTTCCTGGGCTTGAAATACTCTACTGCCACAATTGCATGTGCGATGACAAATTTGCTCCCAGCTTTTACCTTTATCCTTGCACTCATCTTCAGACAAGAGTACCTGAAAATAAGGGCATGGAGTGGGCAAGCAAAGATAATAGGAACTGTATTGTGTGTGGGTGGAGCCTTGGTATTGTCATTCTACCATGGAAATGTCATTGACATAGGTGAATCAACTATTCACTGGGGATACGCAGAGAGAATGCAAGCAACAAGCTCCTCTGCCAAACCCAATACGTTTCTTGGCCCTTTCTTCTTGGTTGTTAGTGCTCTCGTCTGGGCAGTATGGTTCGTCGTCCAAGCGGACATGGCAAAAAATTTTCCAGCTCCGTACACGAGCACAACCTACATGTGCTTCTTGGCGAGCTTCCAGTGTGTGGTCATTGCTCTGTCTTTTGATCGCAGCGCTTCAGCTTGGTCCCTCGCAAATCCTATCCGAGTCATTTCTGCTCTTTATTCGGGGGTTCTTTGCACAGGAGTGGCGTATGGGTTCATGTCGTGGACTATTGAGAGGAAAGGTCCTCTTTATGTGTCTGTGTTCACCCCCTTGCAGCTCGTCATCACTGCTTTTATCAGCTGGGCTCTGCTTCGCGAGGAAATATACGTCGGAACTGCTATAGGGTCGCTGCTTATAGTTATGGGACTCTACTCTGTGTTGTGGGGGAAGAACAGGGAGGTTACCAAGAAAGACAATAATGAAGATATAGAATCAGCGGCGGAGAAGAAGGCAAAAGAGGCGAAGAATAGCGACTTGGGATTGCAGTCCTTTATGGTGTCTTCAAACTCAAGCAATGAGTTTGCTGCTAGCTAG 1116 0.4767 MASGFLPFLAMAFVQLGYAGMNIISKLAMQSGMNPIVLAAYRQIFATLAIAPFAYFFERKTVPKLTRPIVFQILLSSLTGVTGNQVFFFLGLKYSTATIACAMTNLLPAFTFILALIFRQEYLKIRAWSGQAKIIGTVLCVGGALVLSFYHGNVIDIGESTIHWGYAERMQATSSSAKPNTFLGPFFLVVSALVWAVWFVVQADMAKNFPAPYTSTTYMCFLASFQCVVIALSFDRSASAWSLANPIRVISALYSGVLCTGVAYGFMSWTIERKGPLYVSVFTPLQLVITAFISWALLREEIYVGTAIGSLLIVMGLYSVLWGKNREVTKKDNNEDIESAAEKKAKEAKNSDLGLQSFMVSSNSSNEFAAS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5657g00039 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 326 - -
Pral5657g00039 371 PANTHER WAT1-RELATED PROTEIN 6 332 IPR030184 GO:0016020|GO:0022857
Pral5657g00039 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 141 - -
Pral5657g00039 371 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Pral5657g00039 371 Pfam EamA-like transporter family 13 148 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5657g00039 Pral-Chr5657 158668 161074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5657g00039 3 339 Nodulin-like Gene Family AT1G09380 56.497 1.96e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5657g00039 - - gmx:100811613 483.411