Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5657g00023 ATGCTCCATTTGGGTGTGGGGAAGATGAAGAATAGGGATAATAGTAGTTATTCTGATTCATTTCAATCACTTAGACAAAGACGCGGGTGGATCACAGTCAGGAGAGGAAGGGGATCTGGCACTGTTACAGTGTATAAGCACTCTTCTTCATACTCGAAACAGCTCCTTCCCCGCTGTCTGGTCTCCCAGAATTTCATCGCACTTAGGTTGGGGCCCCACTGGTTTACACTAAGGGATCTTGAAATTGCTACGAATCGGTTTTCCAAAGAGAATGTGATCGGTGAGGGTGGTTATGGAGTTGTATATCGGGGACAGCTGATAAATGGGAGTCCAGTGGCAGTCAAAAAGATACTCAATAACATTGGTCAAGCCGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGGCATGTACGACATAAGAATTTGGTCCGCCTTTTGGGGTACTGCATCGAGGGGACGCACAGGATGTTAGTCTATGAGTACGTCAATAATGGAAATTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGACGCGCGAATGAAGATTCTTCTTGGCACAGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGAGATATCAATTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGTCATGTCGCAACACGAGTTATGGGGACCTTTGGATATGTGGCCCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAAGCAATCACAGGAAGGGATCCAGTTGACCTTGGTCGACCAACTCATGAAGTTAATCTGGTTGACTGGCTGAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTAGTTGACCCAAATATCGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTTTTGACTGCTTTGAGATGTGTAGATCCTGATTCTGAGAAGAGACCGAAGATGGGCCAAGTTGTGCGGATGCTGGAATCCCATGAGTACCCCTTAGCTAGAGAGGACCGAAGGCACCGGAGAAATCAAGGGGATAGCACGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATAGATCAGAGAGCAGAGGATAA 1197 0.4586 MLHLGVGKMKNRDNSSYSDSFQSLRQRRGWITVRRGRGSGTVTVYKHSSSYSKQLLPRCLVSQNFIALRLGPHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWDARMKILLGTAKALAYLHEAIEPKVVHRDINSSNILVDDDFNAKVSDFGLAKLLGAGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDLGRPTHEVNLVDWLKMMVGSRRSEEVVDPNIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLAREDRRHRRNQGDSTEIESQKEYSDTDRSESRG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5657g00023 398 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Pral5657g00023 398 MobiDBLite consensus disorder prediction 1 20 - -
Pral5657g00023 398 FunFam Putative receptor-like protein kinase 69 162 - -
Pral5657g00023 398 PANTHER OS01G0323000 PROTEIN 63 388 - -
Pral5657g00023 398 MobiDBLite consensus disorder prediction 357 398 - -
Pral5657g00023 398 SUPERFAMILY Protein kinase-like (PK-like) 71 366 IPR011009 -
Pral5657g00023 398 Gene3D Transferase(Phosphotransferase) domain 1 163 375 - -
Pral5657g00023 398 CDD STKc_IRAK 93 359 - -
Pral5657g00023 398 FunFam Putative receptor-like serine/threonine-protein kinase 163 374 - -
Pral5657g00023 398 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5657g00023 398 Gene3D Phosphorylase Kinase; domain 1 50 162 - -
Pral5657g00023 398 Pfam Protein kinase domain 88 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5657g00023 Pral-Chr5657 116892 120073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5657g00023 75 360 Trihelix Transcription Factor Family AT1G70460 51.034 2.99e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral5657g00023 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5657g00023 - - qsa:O6P43_007383 645.195