Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5657g00004 ATGGATTATCCAAGGACCAATGGTTGGCAGGATACTGGTACTCTTGATAGGAGGCAGATCAGAAAGGGGAAGGCATCCCAGGAATCCTTTATTGAAGATTGGGCAGAGGATTTTCGATTGCCTATCAATCACAGGCCAACAGAAAATGTTGATCTAGACAATGTCGAACAAGCTTCTCTGGACACACAGTTAACATCGTCTAATATTGGATTTAAGCTACTTCAAAAGATGGGGTGGAAAGGAAAGGGTCTGGGGAAGAATGAGCAAGGAATTACTGAGCCAATAAAATCTGGTATCAGAGATCCCAGATTGGGCGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACATCCAGCGAAAGAAACTTGATGTAGAGTTGGAGGATACAGAGGAAACTATGAGGAAGCGAGAGGTTTTGGCGGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTCTTTTGTGACCTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCACATTTGAGCTCATACGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGTGGTAGCAGCCGAGATGATAGGCAAAAAAGAGAACAGCAGCGTCAAGAGAGGGAAATGGCTAAATTTGCCCAAATGGCTGATGCTCGTAAGCAGCAACAGCTACAACAACAACAGGAAGAATCTGGATCTGCTCCGGCTTCCTCTGAATCTAGAACTGCTACTGCACTTGCAGATCAGGATCAGCGGAGGACTTTGAAGTTTGGGTTTTCATCCAAGGGAGGTGCTTCTAAGAACACATTCGGTGGTGCTGCAAAGAAGCAAAAAGTTGCCATGTCTTCTATATTCAGTGCCGACGCTGAAGAAGAATAA 906 0.4349 MDYPRTNGWQDTGTLDRRQIRKGKASQESFIEDWAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEDTEETMRKREVLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGGSSRDDRQKREQQRQEREMAKFAQMADARKQQQLQQQQEESGSAPASSESRTATALADQDQRRTLKFGFSSKGGASKNTFGGAAKKQKVAMSSIFSADAEEE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5657g00004 301 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Pral5657g00004 301 SMART G-patch_5 64 109 IPR000467 GO:0003676
Pral5657g00004 301 MobiDBLite consensus disorder prediction 227 258 - -
Pral5657g00004 301 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 300 - -
Pral5657g00004 301 MobiDBLite consensus disorder prediction 1 23 - -
Pral5657g00004 301 MobiDBLite consensus disorder prediction 194 301 - -
Pral5657g00004 301 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Pral5657g00004 301 MobiDBLite consensus disorder prediction 194 223 - -
Pral5657g00004 301 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5657g00004 Pral-Chr5657 35948 39907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5657g00004 1 301 C2H2 Transcription Factor Family AT5G26610 66.118 8.98e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5657g00004 - - gmx:100785068 451.44