Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5655g00007 ATGGCGTGGAGAGAGTTTAGAAGAGAGAGAATATATACGAACTTTGCCAGAGCTTTTGCTACAGTAGCGTCTAGGCATGTTGCCCGGTCATGTTCTTCATTTACCTTCGCAGCAAAGTCTGCTTATGTATCAGCAGGATGCTTGACCGAGTTTATCAGTCACTCATCTGCCGGAGCATCTGGTTTTTGCAGTGGAACAAAAGAACATGGAATACAATACCGGTGGTTCCATGCTAATCCAGAACTATGGGCAAGAAGAAATGATGAGTTATTTGGTCTAAAGACTCCAAAGAAGGAAAAGCGTGTGAGAAGGGACAGCAAAAATCAGCCCCCTGTTGAAGCTCCATACGTTCCTCGTAAGGTCAAATCTACTAAATCCACTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGCTGAGCTGGCAAAGCGTACCGGAAAGTCAGTATCTTCTCTGCAAGATATTCTAGTAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAACTTGTTGCAATGGAAGTTGGTGTCAATATTAAGAGGCTACATTCTACTGAAGGTGCAGAGATTTTACCCCGGCCTGCAGTTGTAACAGTTATGGGTCATGTTGACCATGGTAAAACCTCCCTCCTTGATGCTTTACGTCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGCATCTAGGTGCCTTTGTGGTGGTCATGCCATCAGGAGCGTCAATCACATTTCTGGACACACCTGGTCATGCTGCGTTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTTACAGATGTGGTGGTACTTGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCAGCTAATGTACCAATAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAGAGTAAAACTTCAGCTTGCATCAGAGGGCGTGTTGCTGGAAGAGATGGGTGGTGATGTTCAAGTGGTTGAAGTTTCTGCAACTATGAAAACCGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCGGAAATGATGGACCTGAAAGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTGGAAGCAAGGCTTGATAAAGGACGAGGTCCATTAGCTACTGCTATTGTGAAGGCAGGGACTCTAGTTTGTGGTCAGCATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACTGGTAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCATTCAGAGGAGCGAGCACGATTGCTTAGTGCTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTTCAGGAAAAGACAGATTCTGTGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTTCAGGGCACTGTTCAAGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTGTCAGGTTTTCGTGAACGTTGTACATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCCCAAGCTTGTGGTGCGTGCGTAGTTGGATTCAATGTGAAGAGTCCACCTAGTCCTGTTAGTCAGGCTGCAGGGCGTGCCAATATCAAGATAGTGCTGCACCGTGTGATTTACCATCTCTTGGAGGAGATAGGCAATTTGATAATAGAGAAGGCTCCAGGTACATCTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGGGTATATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGGTGTCGGGTTATTGATGGTTGTGTGACAAAATCAGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTGATGTTTGAAGGAAACTGCGCGTCTCTGAGAAGGGAAACGCAGGACGTGGAGGCAGTGAAGAAAGGAAGTGAGTGTGGACTCGTAATAAGTGATTGGCACGATTTGCAGGTTGGAGATGTGATACAGTGCTTGGAACAAGTGGTGAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGAGCTGTTCGAATTGAGTGTTGA 2169 0.461 MAWREFRRERIYTNFARAFATVASRHVARSCSSFTFAAKSAYVSAGCLTEFISHSSAGASGFCSGTKEHGIQYRWFHANPELWARRNDELFGLKTPKKEKRVRRDSKNQPPVEAPYVPRKVKSTKSTPDKTIEIFEGMTIAELAKRTGKSVSSLQDILVNVGEKVESEFEPLSVDIAELVAMEVGVNIKRLHSTEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVVMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPERVKLQLASEGVLLEEMGGDVQVVEVSATMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVHSEERARLLSAGRKRKYEEDRLKKMVQEKTDSVESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSCQVFVNVVHVGVGPISQSDVDLAQACGACVVGFNVKSPPSPVSQAAGRANIKIVLHRVIYHLLEEIGNLIIEKAPGTSETQVAGEAEVLGIFELKGRSKSKGPDVKIAGCRVIDGCVTKSGTMRLLRSGEVMFEGNCASLRRETQDVEAVKKGSECGLVISDWHDLQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5655g00007 722 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 201 371 IPR000795 GO:0003924|GO:0005525
Pral5655g00007 722 Pfam Translation-initiation factor 2 478 592 IPR023115 -
Pral5655g00007 722 SUPERFAMILY Translation proteins 605 707 IPR009000 -
Pral5655g00007 722 CDD mtIF2_IVc 610 700 - -
Pral5655g00007 722 MobiDBLite consensus disorder prediction 95 115 - -
Pral5655g00007 722 FunFam Translation initiation factor IF-2 198 373 - -
Pral5655g00007 722 NCBIfam small GTP-binding protein domain 204 356 IPR005225 GO:0005525
Pral5655g00007 722 Gene3D - 199 373 IPR027417 -
Pral5655g00007 722 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 97 717 IPR015760 -
Pral5655g00007 722 SUPERFAMILY Translation proteins 375 457 IPR009000 -
Pral5655g00007 722 Hamap Translation initiation factor IF-2 [infB]. 8 708 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pral5655g00007 722 CDD IF2_mtIF2_II 377 472 IPR044145 -
Pral5655g00007 722 NCBIfam translation initiation factor IF-2 129 705 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pral5655g00007 722 CDD IF2_eIF5B 205 368 - -
Pral5655g00007 722 Gene3D - 498 602 IPR036925 -
Pral5655g00007 722 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 484 609 IPR036925 -
Pral5655g00007 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 371 IPR027417 -
Pral5655g00007 722 Pfam Elongation factor Tu GTP binding domain 206 362 IPR000795 GO:0003924|GO:0005525
Pral5655g00007 722 Gene3D Translation factors 374 492 - -
Pral5655g00007 722 FunFam Translation initiation factor IF-2 497 604 - -
Pral5655g00007 722 Gene3D Translation factors 604 707 - -
Pral5655g00007 722 FunFam Translation initiation factor IF-2 605 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5655g00007 Pral-Chr5655 65400 70467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5655g00007 202 592 Eukaryotic Initiation Factors Gene Family AT1G21160 26.144 1.48e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5655g00007 K02519 - qsa:O6P43_014736 1075.46