Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5653g00018 ATGGGCGGGGTCTCCTCTGTTTTTCGAATTCAGAGTGTGTTTGCTAGCCCGGGCGTAAAAAAGAATAAGGCGCAAGCGGAAATGGGGTCATCTGTGATGATGCGTCAGGATCTAAGTGGTAGCGAAAGTAATCAAGTTAACTTCCGCATTGAAGTCCCAACTTGGAGTGCTCCAGTTAGTCCTTTGAACAGTCCCTTGGTGAGCCCGAACAATGGAAGACATAGTGATTTCGTTCAATATTGTTACGTGTGTCCCCCGCCAAGTCAATATTGGTCGGCACCAGAGATGGTCACGTCTGATGCATCATCAGGGACGACGCATCCTGCATTATTTGATTTAACTGCATTATCTACTGATACTTCTCCTCATCACAGTCCACGAGGTAGAAGTCCTAACCAAAATCTCAGGAGCCGAAGTGGAGCTTCCTCGCCAATACGTCCCAGGTTATCTCTCGAGACCTCAGTAGCACGTCGCGACTTCAATGCCCCCTCTCTCAACGTTCACCCCTTACCATTGCCTCCTGGGGCACCCTTGCTTTCCCCATCCCCTAAATTCTCCCCCACTGTGCCTAAGTTAGAGTCCTCCTCGATGAAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGTGGTACGTTTGGAAGTGTTTATGTGGCTACCAACAGAGAAACTGGAGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCCGATGACCCCAAATCCGCCGAGTGTATTAAACAGTTAGAGCAGGAAATCAAAGTTCTTAGCCAGCTGAAGCATACAAACATTGTGCAGTATTATGGCAGTGAATCGTTGAAGACCGGTTTTATATTTATCTGA 840 0.4726 MGGVSSVFRIQSVFASPGVKKNKAQAEMGSSVMMRQDLSGSESNQVNFRIEVPTWSAPVSPLNSPLVSPNNGRHSDFVQYCYVCPPPSQYWSAPEMVTSDASSGTTHPALFDLTALSTDTSPHHSPRGRSPNQNLRSRSGASSPIRPRLSLETSVARRDFNAPSLNVHPLPLPPGAPLLSPSPKFSPTVPKLESSSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLKHTNIVQYYGSESLKTGFIFI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5653g00018 279 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524
Pral5653g00018 279 SUPERFAMILY Protein kinase-like (PK-like) 186 273 IPR011009 -
Pral5653g00018 279 MobiDBLite consensus disorder prediction 116 149 - -
Pral5653g00018 279 Gene3D Phosphorylase Kinase; domain 1 184 279 - -
Pral5653g00018 279 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 97 271 - -
Pral5653g00018 279 Pfam Protein kinase domain 202 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5653g00018 279 MobiDBLite consensus disorder prediction 177 197 - -
Pral5653g00018 279 ProSiteProfiles Protein kinase domain profile. 201 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5653g00018 279 MobiDBLite consensus disorder prediction 116 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5653g00018 Pral-Chr5653 82845 85467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5653g00018 18 278 MAP Kinase Kinase Kinase AT5G66850 49.470 6.38e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral5653g00018 Pkinase 3.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5653g00018 - - qsa:O6P43_033798 300.827