Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5653g00003 ATGGCAGGTGGGGTGATAGGAGAAGCTGCTTTGGGAGCTCTACTTGAGGAAGGGCTGAGAAGCGGGTTAGATTTGGTGGACAAGGCTATCAAGTTCCCAACCAAACGTGAGGACCTCCGAGACACCGTTCAGCGGTTGACTCCACTGATCCGGCAGATGAAGGCATATGACGAGACATGGGATCGCCCTCTGGATCAAATGGAACGAGTGTTGAGGGAATTGGAAGAGGCAGATAAGCTTGTTCATAAGTACTCCAAGTTCCATTGGTGGAGATCTCTGTCTCTTCCTTTTTATCATGATAGGCTTGAGGAAAGGAACAAAAAGCTTGAGAGGGCCATCACTGTTGATATGCAAGTTTACATGGCGAGAGACGTGAAGGAGATTTTGTCGACCCTGAAAGAAATTATGTCGAATCTTGTCAATAAGCCTCTTTTTGGGCTAACAAGTAGCGGCACTGTCGTTAAGGGCCTGTGCGGGGCTCCTGAGAGACCAAAGTATACAGTGGGATTGGAAGGGGCCTTGAAGAGGTCCAAGAATGAGCTGCTGAACGGTGATGAACCTGTTCTTGTATTGACTGGCTTGCCGGGATCGGGCAAGACAACCATGGCTAAAGAACTTTGCTGGGACCCCGACGTTAAAGACAAGTTCGGGGAAAACATCTTCTTTGTGATCTTTTCAAAAACGCCCAACTTGAAGAATATTGTGCAGACAATATTTGGACACTGTGGGCTCCCAGCGCCTGAGTTTTCGAGCGATGAAGACGCAATTAATCGACTTGGTGTTTTGCTAAGGCAATTCGGGGGAAGGCCGATATTGTTGGTCCTGGATGATGTTTGGCAGGGCTCAGAAGCTATTGTTGAGAAATTTAAATTCGACATTTCTAAAGTTTTGGTCACTTCAAGATTTGTATTCCCTAGATTTGCCACTTCATGCCACTTGGAACCACTTGGTCATGATGATGCGATACGGCTTTTTCATCACTTTTCTCCATTAGATGACAGGTGCCCATACAAACCCGATGAGAAACTTGTGCGCGAGGTAGTAAGAGGTTGCAAGGGTTCACCATTGGCAATTGAAGTTATTGGCGGATTGCTCTGTAAGCAGCCCTTTGAGGTGTGGCAAAAGATGAAGGAGCTTTTGCTAAGCCAGTCTATATTTAATGCTAATACTGACTTGCTCCATCGCCTCCAAACTAGCTTAGAAGTAATGGGAGATAAGTTCCCCATCAAGAAGGAGTGCTTTATGGACCTAGGCTTATTTCCTGAAGACAAAATGATCCCTGTTGATGCCCTCATTGACATGTGGGCGGAACAGTATAACCTAGATGAGGGTGGCATAGAAGCAATGGCCACGATCCATGAATTAACTAACAGTAATTTGGCCAAGACTGTCATTAGAAGGAAAGTAGCAAGGGACACAGACAAGTACTACAATAATCACTTTGTCATGCTGCATGATCTTCTCAGAGAACTAGCCATTCATCAAAGCAGCCTAGAACCCTTTGAAGAGAGGAAAAGGTTAATTATTGACTTGGGTGAAAATAATCATCCCAAATGGTGGCCAGAACAGAAGCAGCAAGGGGTCATTGCCCGCATCTCCTCATTATTATTTGGATGGTGGATGGAACAGAAGCAGCAGCAAGTTACTGCCCACTCATTATCTATATATGCAGATGACACGTCTACTGCAGAATGGTGCAACATAGAATCTGATGAAACCAAGGTTTTGATTTTAAATCTTCAAAGTAGCAATTATGCGATACCAAATTTCGTGAAGCAAATGAGAAAACTTAAGGTTCTGGTAGTCACGAATTACGGTTTCCATATTTCCAAATTGAACAAATTTGAGTTGCTTGGTTCTCTATCTGCCCTGAAAAGAATTAGATTGGAGAAGATTACAGTACCTTCCCTGTGCAAATTGATGAATCTGCAAAAATTATCGCTTCATATGTGTACTACATGGCCAGCTTTTGAAAGTTGTTCCATGGACATTTCAGAGGCGCTGCCAAATCTAGTGGAGTTGAATATTGATTACTGTAAAGATCTGGTGAAATTGCCTGTTGATATTTGCAAAATTAACCCCTTGAAGAAGCTTAGTATCACTAATTGTCACAAGTTTTCTGAACTGCCAAAAGAAATAGGAAGCCTGGAGAATCTGGAAGTGCTGAGGCTCAGTTCCTGTTCTAATTTGGAAGAGATGCCAGTCTCCATCAAAAGGCTTCAGAAGCTAAGCCATCTTGACATCTCAGACTGCATAAGCCTTAAGCAACTACCAGAGGAGTTTGGGTGCTTAGGCAATCTAGAAAAGCTCTACATGAGGGGTTGCTCAAGATGTGAATTGCCAGTCTCAGTCATGAATCTCCTGCGTTTAACGCTTGTGATATGTGATGAAGACACAGCTGCATCCTGGGAAGATCATCTTCCTCATCTTACTATAGAGCAGCCCAAAGCAGATATTAACTTGGATTGGCTTCAAGGAGCTTAA 2484 0.4376 MAGGVIGEAALGALLEEGLRSGLDLVDKAIKFPTKREDLRDTVQRLTPLIRQMKAYDETWDRPLDQMERVLRELEEADKLVHKYSKFHWWRSLSLPFYHDRLEERNKKLERAITVDMQVYMARDVKEILSTLKEIMSNLVNKPLFGLTSSGTVVKGLCGAPERPKYTVGLEGALKRSKNELLNGDEPVLVLTGLPGSGKTTMAKELCWDPDVKDKFGENIFFVIFSKTPNLKNIVQTIFGHCGLPAPEFSSDEDAINRLGVLLRQFGGRPILLVLDDVWQGSEAIVEKFKFDISKVLVTSRFVFPRFATSCHLEPLGHDDAIRLFHHFSPLDDRCPYKPDEKLVREVVRGCKGSPLAIEVIGGLLCKQPFEVWQKMKELLLSQSIFNANTDLLHRLQTSLEVMGDKFPIKKECFMDLGLFPEDKMIPVDALIDMWAEQYNLDEGGIEAMATIHELTNSNLAKTVIRRKVARDTDKYYNNHFVMLHDLLRELAIHQSSLEPFEERKRLIIDLGENNHPKWWPEQKQQGVIARISSLLFGWWMEQKQQQVTAHSLSIYADDTSTAEWCNIESDETKVLILNLQSSNYAIPNFVKQMRKLKVLVVTNYGFHISKLNKFELLGSLSALKRIRLEKITVPSLCKLMNLQKLSLHMCTTWPAFESCSMDISEALPNLVELNIDYCKDLVKLPVDICKINPLKKLSITNCHKFSELPKEIGSLENLEVLRLSSCSNLEEMPVSIKRLQKLSHLDISDCISLKQLPEEFGCLGNLEKLYMRGCSRCELPVSVMNLLRLTLVICDEDTAASWEDHLPHLTIEQPKADINLDWLQGA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5653g00003 827 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Pral5653g00003 827 SUPERFAMILY L domain-like 548 811 - -
Pral5653g00003 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 139 IPR008808 -
Pral5653g00003 827 Gene3D - 316 397 IPR042197 -
Pral5653g00003 827 Gene3D - 398 495 IPR036388 -
Pral5653g00003 827 PRINTS Disease resistance protein signature 188 203 - -
Pral5653g00003 827 PRINTS Disease resistance protein signature 714 730 - -
Pral5653g00003 827 PRINTS Disease resistance protein signature 265 279 - -
Pral5653g00003 827 PRINTS Disease resistance protein signature 351 365 - -
Pral5653g00003 827 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 824 IPR039203 GO:0050832
Pral5653g00003 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 416 IPR027417 -
Pral5653g00003 827 Gene3D Ribonuclease Inhibitor 534 809 IPR032675 -
Pral5653g00003 827 Pfam NB-ARC domain 174 386 IPR002182 GO:0043531
Pral5653g00003 827 Gene3D - 155 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5653g00003 Pral-Chr5653 24546 28302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5653g00003 193 779 WRKY Transcription Factor Family AT5G45050 23.684 1.07e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5653g00003 - - gmx:100792590 894.034