Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5653g00002 ATGGCAGAAACGGTCATAGAATTTCTACTCGACGAACTGCTGAGCAAGGTTTTGGAGGCGAAGGACAGGGCAATTCAGTTCAGACCCACCCTTGAACGCATGGCCACCACCCTCAGGTCAATAAAACCAGTGATCGAAGAGACAAAACAATACAACAGGCAACTAGATCGGTCAGAGGATGAAACAAAGAAGTTAATTGAAGATGTGAAGAATGGGGAAAAGCTTGTTCTCAAGTGCTCAAAAATCCAGTGGTGGGAGTGCTGCTATAGGCCCCAATACCAGGAGCAACTTGAAGATTTGGATCAGTCACTTGTCAGGTTCTTTCAAGTTGATATGCCAGTTCAGACGGCGAGGGATGTGAAGGAGACGCTGGTAGAGGTGAGAGGCATTCATATGGAGATTAAGAAACTGAATGCGGTTGCGAGAAATGAAAGGGGCCTGTGCTCGGCTCCCGAGCCCCCAACATTCACAGTTGGATTGGATGTTCATGTTGGGGAATTGAAGGTGCGGCTACTCCAGGATGACGTGTCAGCGATCGTGGTCACCGGCTCGCCCGGTTCTGGGAAGACCACATTGGCCAAAAAGTTCTGTTGGGATGCTAATGTCAGAGGTAAATTCAAGGACAATATCTTCTTTGTCAAATTCTCGGAGACGCCAAATTTGAACGCTATCGTACAGAAACTTTATCAACACAATGGTCGCTCAGTGTCCGAGCCTCAAAATGATGAAGAAGCGATTGACCTATTGAAACTTTTGCTAAAGCAAATTGGGGAAAATCCTACACTGTTGGTTCTGGACGATGTTTGGGATAGATCGGAATCTCTTGTTGATAATTTTCGCATGCAGCTGCCGGAATATAAGATTTTAGTGACTTCCAGATTCGCAATTCGAAGATTCGGCACCCCCTATTGCTTGAGACCCCTTGGTAATGAGGATGCTGTGAAGCTTTTCCGCCACTCCGCAGAACTGAAGGAGAGCCGTTTTGATGTTCCTGATCATATTGTGAGAGAGATAGTCCAAGGCTGCAGTGGTTCTCCAATGGTGCTAAATGCGATTGGCAGGTCACTCTGTGGGCAGGATGCTGTGGTATGGCAAAGCAGGGCAACAGAATTGTCGAAGGGTCGCCCGATTTTTGAATCTAATGAAAATCTGCTCGCTTTTCTCCAAAAAAGCTTCGATGTCTTGGACACTAAGTCAGTAATTAAGGAGCGTTTCATGGACCTAGCTTTATTTCCTGAAGGCCAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAATTGTATGGAGAAGATGGCGTAAATGCAATGGAGAAAATTTATGAACTGGCCACCCGTAACATGGTTGAAATTGTCGTAAGGAAATTTCCAAGTGGCACAGGTAACTTCAGTAGCCACTTTGTCAATCGGCATGATCTTTTTCAGGAGCTAGCTATCCATCAAAGGCAAATTAGCCAGGAGCCACTGGAAAAGAGGAAAACACTGATTATTGACATAACTGCAAACGAACTTCCCCAGTGGTGGACTGACCAAAAAGAGTATCATATAGCTGCCCGCGTATTATCTATATCAACTGATGAATTATTCTCTTCTGATTGGTGTAACTTGATACCAACTGAAGTTGAGGTTCTAGTTTTGAACTTTCGAGGGAAGAAGTACACCATACCAAGGTTCATAGAGAAAATGAATAAACTAAAAGTTCTGTTAATCACAAATTATGGTTTCCACCCTGCTGCTGAGTTAGAGAATTTAGAACTGCTTAATTTGTTGCCCAATGTTAAAAGAATTAGACTGGAGCGTGTATTGATCCCCTCCCTCGTTGAGAAAAGAGTGCACTTGAAGAATCTTCAGAAACTGTCTCTGTTTATGTGCAATGTGAATGAAGCTTTCGAAAATTGTTCCATCCCAGTTTCAGATATGATGCCAAACTTGGTGGAACTGAACATTGACTACTGTAATATGATGGAATTGCCAGTTGGGTTGTGTGGTTTTGTGTTCTTAAAGAAGCTTAGTATTACCAGTTGCCACAAGCTTTCCGCACTTCCTGAAGAAATTGGAAAGTTGGTCAATTTGGAATTGCTAAGGGTTAGTTCTTGTTCTGATTTAACAGAGTTTCCGGACTCAGTTTCCAGCCTTCAAAAGCTAAAATTTCTTGATATGTCTTACTGCATAAGCCTCAGTAGATTACCAGATCATATGGGTAAGTTACTTAATTTGAAAGAGCTCTACATCACGCGTTGCTCGAGATTATGTGAGCTGCCACCCACAATCATTAACCTTACGGGGCTAAGAGTTGTGGTGTGCGATGAAGATGTGGCTGCTTTATGGGAACCTTGCAAAACCATCTTTACTGATCTGCATGTAGAGGTGAACCAAGCTGATTTAGCCTGGAATGGCTTTGAAATTTCATTGCCAATAAATGCGCTTTCTGGCCAGGGGCAACATATTGGAGCGGGAATGAAGATATGGAATGAAAATGAGAAGATATGTGCAACGTAA 2502 0.4341 MAETVIEFLLDELLSKVLEAKDRAIQFRPTLERMATTLRSIKPVIEETKQYNRQLDRSEDETKKLIEDVKNGEKLVLKCSKIQWWECCYRPQYQEQLEDLDQSLVRFFQVDMPVQTARDVKETLVEVRGIHMEIKKLNAVARNERGLCSAPEPPTFTVGLDVHVGELKVRLLQDDVSAIVVTGSPGSGKTTLAKKFCWDANVRGKFKDNIFFVKFSETPNLNAIVQKLYQHNGRSVSEPQNDEEAIDLLKLLLKQIGENPTLLVLDDVWDRSESLVDNFRMQLPEYKILVTSRFAIRRFGTPYCLRPLGNEDAVKLFRHSAELKESRFDVPDHIVREIVQGCSGSPMVLNAIGRSLCGQDAVVWQSRATELSKGRPIFESNENLLAFLQKSFDVLDTKSVIKERFMDLALFPEGQKIPAASLVDMWVELYGEDGVNAMEKIYELATRNMVEIVVRKFPSGTGNFSSHFVNRHDLFQELAIHQRQISQEPLEKRKTLIIDITANELPQWWTDQKEYHIAARVLSISTDELFSSDWCNLIPTEVEVLVLNFRGKKYTIPRFIEKMNKLKVLLITNYGFHPAAELENLELLNLLPNVKRIRLERVLIPSLVEKRVHLKNLQKLSLFMCNVNEAFENCSIPVSDMMPNLVELNIDYCNMMELPVGLCGFVFLKKLSITSCHKLSALPEEIGKLVNLELLRVSSCSDLTEFPDSVSSLQKLKFLDMSYCISLSRLPDHMGKLLNLKELYITRCSRLCELPPTIINLTGLRVVVCDEDVAALWEPCKTIFTDLHVEVNQADLAWNGFEISLPINALSGQGQHIGAGMKIWNENEKICAT 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5653g00002 833 Gene3D - 308 392 IPR042197 -
Pral5653g00002 833 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 135 IPR008808 -
Pral5653g00002 833 SUPERFAMILY RNI-like 539 767 - -
Pral5653g00002 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 406 IPR027417 -
Pral5653g00002 833 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 794 IPR039203 GO:0050832
Pral5653g00002 833 Gene3D Ribonuclease Inhibitor 491 783 IPR032675 -
Pral5653g00002 833 Gene3D - 137 299 IPR027417 -
Pral5653g00002 833 Coils Coil 48 68 - -
Pral5653g00002 833 PRINTS Disease resistance protein signature 255 269 - -
Pral5653g00002 833 PRINTS Disease resistance protein signature 711 727 - -
Pral5653g00002 833 PRINTS Disease resistance protein signature 178 193 - -
Pral5653g00002 833 PRINTS Disease resistance protein signature 342 356 - -
Pral5653g00002 833 Pfam NB-ARC domain 163 368 IPR002182 GO:0043531
Pral5653g00002 833 CDD AAA 166 301 - -
Pral5653g00002 833 ProSiteProfiles RPW8 domain profile. 1 146 IPR008808 -
Pral5653g00002 833 Gene3D - 393 482 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5653g00002 Pral-Chr5653 11885 15267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5653g00002 175 732 WRKY Transcription Factor Family AT5G45050 23.316 1.54e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5653g00002 - - pcin:129321618 1316.21