Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5652g00032 ATGAGTCACAATAAGGAACCACTACCGGTGCTAGTCAGAAGGACTTCCGGTGATGAAATCAGAAACTTGGCCTTGGCCTCAGTCTCCAGCGACCTCTTGTCAGCATTTGGCTCCGACATTGTTGATGATAATCGCCTAAACCTTAGAAAATATGTTATCGCTCCCTCTGATCATAGATATCGGCTGTGGCAGACATTCCTTGTTGCATTGGTGGTATACTCAGCATGGGCATCTCCGTTCGAGCTGGCTTTCACAGAAGTGGCTGTTGGGTCATTGTGGCCCGTTGATCTACTCGTCGATGCCTTCTTCGCCGTTGATATAGTCCTAACTTTCTTTGTAGCTTACTTGGACAAATCAACCTATCTCCTCGTTGATGACCACAAGAAGATCGCCATCAGGTACATGAGAAAGTTTCATTTTCCCATGGACGTGGCAGCAACTCTGCCATTTCTGCAGATATACCAAATCCAAAAGGGCAGAACATATGAAGGCGAAGTCTTTGGTTTCCTAAATATGCTCAGGCTTTGGCGATTAAGGCGTGTTAGCCAACTTTTTGCAAGGCTAGAGAAAGACATACGAATTAGTTACTCGGCCACAAGATTTTGCAAACTTATATGCGCAACGCTATTTGTAGTGCACTTCGCAGCCTGCATGTATTATTGGATGGCTGCCCACAACAAGACACCTGAGAACACGTGGATTGGGAAGCCGGTGCACGATTTCGAATACAGGAGCGTCTGGCTGAGATACAAGTATGCCATGTATTGGTCTATGGTCACTCTTACCACTGTAGGCTACGGGGATTTTTATGCTGTGAATATGGGCGAGAAAATCTTCACTATTTTATATATGCTATTTAACATCGGCTTCAGTGCATATATAATTGGAAACATAACAACTCTGGTCGTCCGGGTCACTGTCCGAACTTATACCATGAGGGATGCCATCAATCAAGCACTAACATACGCAAGCAAAAATAGACTCCCAAAAGGCTTGAAAGAGCAAATGCTATCACACATTCATTTGAAGTTTAAAACAGAAGAGGTACAGCAAGAAAGGGTACTACAGGAACTGCCCAAGTGTATTAGGTTGAGTATTGCTCAGCATCTTTTCCGGGAAATAGTTGAAAGTGCATATTTATTTAAAGGAGTCTCTGATCATTTTATCACCCAACTGGTGTCAGAAATCAAAGCAGAATATTACCCACCTAAGGTTGACATTATCTTGCAAAACGAGATGCCGTCATATTTCTATATTTTGGCATCTGGAGCAGTGGATGTAATAATCAACAAGAATGGAACTGAACAGCTATTGTTGAAGGTAGGATACGAAGCGATTGCAGGAGAAATAGCGGTCATGTTTAATATCCCCCAACCTTTCACAGTGAGATGTAGGAGGCTTTCCCAAGTCATCCGAATTAGCCATGATCATTTCAAGCAAATAATGCAACCATACAGTGATGACGGGAAAGCAATTATCACCAACTTCAATCAGTACTTGAAGGGCTTAAAAAAGAGGGTGCGAGACGAAATTCCTTGCCTGACAGAATTGTTGAGCGGCCTTCATGTTGAGCAGGTAACACTAGAACAAGATGTATATCATGAAGGTTCAAATTATCATGAAGATAAGCCATATAAACAAGGAAAGAGAGGAAATTCTAATCCATCGCCAAGCCTCCCACTTAGAGTGAAAATCCATGGACATCATCCTAAAGAGAACAAAATGGAAAATCAAACCCCCCAAAAGCTCATACTTCTCCCAGATACAATGGAAGAACTATTCATATTAGCAGAGAAGAAGTTTGGGAAAAGAGGAGGCAAGGTTCTTATGGCTGATGGCTCAGAAGTAGAAAAATTAAGCGTCTTAAGGGAGAATGATGAGTTGTATATCTTCTAA 1896 0.4225 MSHNKEPLPVLVRRTSGDEIRNLALASVSSDLLSAFGSDIVDDNRLNLRKYVIAPSDHRYRLWQTFLVALVVYSAWASPFELAFTEVAVGSLWPVDLLVDAFFAVDIVLTFFVAYLDKSTYLLVDDHKKIAIRYMRKFHFPMDVAATLPFLQIYQIQKGRTYEGEVFGFLNMLRLWRLRRVSQLFARLEKDIRISYSATRFCKLICATLFVVHFAACMYYWMAAHNKTPENTWIGKPVHDFEYRSVWLRYKYAMYWSMVTLTTVGYGDFYAVNMGEKIFTILYMLFNIGFSAYIIGNITTLVVRVTVRTYTMRDAINQALTYASKNRLPKGLKEQMLSHIHLKFKTEEVQQERVLQELPKCIRLSIAQHLFREIVESAYLFKGVSDHFITQLVSEIKAEYYPPKVDIILQNEMPSYFYILASGAVDVIINKNGTEQLLLKVGYEAIAGEIAVMFNIPQPFTVRCRRLSQVIRISHDHFKQIMQPYSDDGKAIITNFNQYLKGLKKRVRDEIPCLTELLSGLHVEQVTLEQDVYHEGSNYHEDKPYKQGKRGNSNPSPSLPLRVKIHGHHPKENKMENQTPQKLILLPDTMEELFILAEKKFGKRGGKVLMADGSEVEKLSVLRENDELYIF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5652g00032 631 SUPERFAMILY cAMP-binding domain-like 309 500 IPR018490 -
Pral5652g00032 631 ProSiteProfiles cAMP/cGMP binding motif profile. 380 499 IPR000595 -
Pral5652g00032 631 Gene3D Helix hairpin bin 308 370 - -
Pral5652g00032 631 FunFam Potassium channel KAT2 368 504 - -
Pral5652g00032 631 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5652g00032 631 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5652g00032 631 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5652g00032 631 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5652g00032 631 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5652g00032 631 SUPERFAMILY Voltage-gated potassium channels 55 303 - -
Pral5652g00032 631 Gene3D - 61 305 - -
Pral5652g00032 631 FunFam Potassium channel KAT3 62 304 - -
Pral5652g00032 631 Pfam KHA, dimerisation domain of potassium ion channel 562 630 IPR021789 -
Pral5652g00032 631 SMART cnmp_10 380 497 IPR000595 -
Pral5652g00032 631 PANTHER POTASSIUM CHANNEL AKT1 26 517 IPR045319 GO:0005249|GO:0006813
Pral5652g00032 631 Pfam Cyclic nucleotide-binding domain 400 483 IPR000595 -
Pral5652g00032 631 Gene3D Jelly Rolls 371 511 IPR014710 -
Pral5652g00032 631 Pfam Ion transport protein 61 309 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral5652g00032 631 ProSiteProfiles KHA domain profile. 562 631 IPR021789 -
Pral5652g00032 631 MobiDBLite consensus disorder prediction 538 560 - -
Pral5652g00032 631 CDD CAP_ED 380 493 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5652g00032 Pral-Chr5652 167352 173054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5652g00032 5 631 Ion Channels AT4G32650 54.589 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5652g00032 K21867 - qsa:O6P43_015614 837.41