Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00070 ATGGAGGAGAATGAACAGCATAAAAGTAGTGAACTCAGGAGTTCCGGCGAGAGTCGTCCTCCGAATCCGTTCGCTGCTGAATACCGACAATGCCCCAATACCGACCGTGGGGCGGCACCAAGTAGGAGGTCCCTTGTTCGGCATCCTTCTCTTATGAAGACAAAGGTGTCTGAAGTATCTGCTGAGCCAGAACCTGTTATTGAAGATTGCAAGTCTGAGTTCCTACCAAACCTTCGTTCTGGAGGATGTGGTGATATTGGGTTCCGTTCAAGCATGGAAGACGTGTATTTGTGCGTGGACAACTTTTTGCCGAATTATGGACCCAATAACCGCATAGATGGACCCAGTGCATTTTATGGGGTATTCGATGGACATGGTGGCAAGCATGCTGCTGACTTTGCTTGTCATCATTTGCCGAAGTTCATTGGTGAGGATGAAAGCTTTCCAAGTGATATTGAAAGGATTGTTGCGTCAGCATTTTTGCAGACAGACAATGCCTTTGCTGAGGCCTGCTCTCTTGATGCTGACCTTGCCTCTGGCACCACTGCTCTGGCTGCTCTTGTCATTGGAAGGTTGCTGTTGGTGGCAAATGCGGGAGATTGTCGAGCAGTGCTGTGTCGCCGTGGAAAAGCTATTGAAATGTCAAGGGATCACAAACCGACACATAGCAAAGAGTTGAAGCGCATCAAGGCATCGGGGGGTTATGTGTATGATGGGTATCTCAACGGACAGCTCAATGTGGCACGCGCTCTGGGTGATTGGCACATAAAAGGAATGAAAGTCAGTGATGGCGGACCTCTCAGTGCAGAGCCTGAACTAATGACCACAAATCTGACTGAAGAGGATGAATTTCTCATCATGGGCTGTGATGGGATTTGGGATGTTTTCAGGAGCCAAAATGCTGTGGATTTTGCCAGGCGAAGGCTTCAGGAGCATAATGATCCAGCCAGGTGTAGTAAGGATTTGGTTGATGAGGCTTTGAAGAGAAAGAGTGGGGACAATCTAGCAGTGGTTGTGGTTTGCTTTCAGCAGCAGCCTCCAGCTAACTTGGTGGCACCGCGCTCCAGAGTGCAGAGGAGCTTCTCTGCTGAAGGCTTGAGAGAGTTGCAAAGCCTCCTGGATAGTTTTGGTAACTGA 1137 0.4908 MEENEQHKSSELRSSGESRPPNPFAAEYRQCPNTDRGAAPSRRSLVRHPSLMKTKVSEVSAEPEPVIEDCKSEFLPNLRSGGCGDIGFRSSMEDVYLCVDNFLPNYGPNNRIDGPSAFYGVFDGHGGKHAADFACHHLPKFIGEDESFPSDIERIVASAFLQTDNAFAEACSLDADLASGTTALAALVIGRLLLVANAGDCRAVLCRRGKAIEMSRDHKPTHSKELKRIKASGGYVYDGYLNGQLNVARALGDWHIKGMKVSDGGPLSAEPELMTTNLTEEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPARCSKDLVDEALKRKSGDNLAVVVVCFQQQPPANLVAPRSRVQRSFSAEGLRELQSLLDSFGN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00070 378 Gene3D - 60 348 IPR036457 -
Pral5650g00070 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Pral5650g00070 378 PANTHER PROTEIN PHOSPHATASE 2C 57 340 IPR015655 GO:0004722|GO:0006470
Pral5650g00070 378 SMART PP2C_4 69 340 IPR001932 -
Pral5650g00070 378 CDD PP2Cc 79 342 IPR001932 -
Pral5650g00070 378 MobiDBLite consensus disorder prediction 1 59 - -
Pral5650g00070 378 Pfam Protein phosphatase 2C 86 334 IPR001932 -
Pral5650g00070 378 FunFam Probable protein phosphatase 2C 22 64 345 - -
Pral5650g00070 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Pral5650g00070 378 SUPERFAMILY PP2C-like 73 344 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00070 Pral-Chr5650 318670 322048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00070 14 378 PP2C-type Phosphatase Gene Family AT2G25620 69.312 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pral5650g00070 PP2C 4.6e-72 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00070 K14803 - gmx:100815725 605.905