Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5650g00068 | ATGTTAGAGGGTTTCTTCAACTCTTTGCATCTTCTTCCCAGTAGAAAGAAGTCATTCACAATTCTTCATGATGTTAGTGGGATCATCAAGCCTAGAAGAATGACATTGCTCTTGGGGCCTCCAAGCTCTGGAAAGACCACATTACTTCTTGCACTGGCTGGAAGACTGGCTAAAGATCTCAAATTTTCTGGGCGAGTTACGTACAACGGGTATGGCATGGATGAGTTCGTACCTCAGAGAACATCAGCGTACATAAGTCAACATGATCTCCATATAGGAGAAATGACAGTGAGAGAAACATTGGCTTTCTCAGCAAGGTGTCAAGGGATAGGAAGTCGTTATGAGATGCTGGCGGAATTATCAAGAAGAGAGAAGGCAGCGAATATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCGGCAGCACTAGAAGGCCAAGAAACCAATGTGGTTACAGATTATATTATGAAGATTTTGGGGCTAGAACTATGCGCTGATACGCTAGTAGGAGATGACATGATTCGGGGAATTTCAGGTGGGCAAAAAAAGAGAGTCACAACAGGTGAGATGCTGGTTGGACCGGCAAGAGCACTTTTTATGGATGAGATATCAACTGGTTTGGATAGTTCGACCACATTCCAAATGGTGAATTCTCTGAGACAATCAATCCACATCTTGAATGGAACCGCCGTCGTCTCTCTTCTTCAGCCAGCACCAGAAACCTATGAACAATTTGATGATATAATTCTCCTCTCTGATGGACACATCGTCTATCAAGGTCCACGGGAAAATGTGCTCGAGTTCTTTGCATGCATGGGCTTCAAATGCCCGGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTGACTTCAAGGAAAGATCAAGAACAGTACTGGGCAAATAAAGATGAGCCATATGCCTTTGTCACCGTTAAAGAATTTGTTGATGCATTTCAGTCGTTTCACATTGGTCGAAAGCTTGGTGACGAACTTGCTACTCCGTTTGACAAGTCCAAGGGCCACCCTGCTGCTTTAAGCAAGAAGAAGTACGGCGTTAGCAAGAAGGAACTACTAAAAGCCTGCATATCCAGAGAATTTTTGCTCATGAAGAGGAATTCCTTTGTCTATATTTTCAAAACACAGCAACTGATTGTGATGGCTCTCATAACAATGACACTATTTCTACGAACTACGATGCATCGGGACACAATAGCAGATGGCGGCATCTACATGGGAGCTCTGTTCTTCGTACTCATTATGATTATGTTTAATGGATTTTCGGAGCTATCCATGACCATTGCAAAACTCCCTGTCTTCTATAAGCAAAGAGACCTTCTGTTCTATCCATCTTGGGCATACGCATTGCCTACATGGATCCTTAAGATTCCTATCACCTTAGTAGAAGTTGCCGTTTGGGTGGTGTTGACTTATTATGTTATAGGCTTTGATCCAAACATCGAAAGGTTCTTCAAACAGTTCTTTTTGCTCCTGTGTATCAACCAAATGGCATCTGGGCTTTTTCGATTCATGGGAGCAGTTGGGAGGAACTTAATCGTCGCAAACACTTTTGGGTCATTCTCTTTGCTTGCGATTATGGTGATGGGTGGATTTATCCTTGCAAGAGATGACGTGAAGAAGTGGTGGTTATGGGGTTACTGGTTCTCACCCATGATGTATGGTCAGAATGCTCTAGCTGTGAATGAATTCCTCGGAAACAGCTGGGCACATGTTCCTCCTAATTCAACAGAGCCATTAGGAGTACAGGTGCTCAAGTCACGTGGACTCTTCCCTCAAGCATACTGGTATTGGATTGGAGTAGGAGCTTCCATTGGTTACATGTTCCTATTCAATTTCCTTTTCGCTTTGGCCTTGCACTATCTTGACCCATTTGAAAAACCTCAAGCAGTAATATCAAAAGAGGACTTGACTGAGAAAAATGCTAGCAGAAACGGACAGGTCATTGAACTGTCATCAACACAACAAAGGTCATCTGAAAAAGGGAATGAAAGTCGAAGAAGTATGTCATCCAGAACGCTATCTGCAAGAGTAGGTAATGTTAGCGAAGCAGATCACAAGAGGAAACGTGGGATGGTTCTTCCTTTTACTCCTCTTTGTATGACTTTTGACGAAATTAGATATGCCGTGGACATGCCAGAGGAGATGAAAGCACAAGGCATTACTGAGGATAGACTTGAAATATTGAAGGGTGTTACTGGAGCATTTAGGCCAGGAGTTCTTACAGCACTCATGGGCATAAGTGGAGCTGGAAAAACAACTTTAATGGATGTGTTGGCAGGACGAAAAACAACTGGACATATTGAGGGGTCTATTTCCATTTCAGGTTACCCCAAAAAGCAGGAGACTTTTGCTCGCATATCAGGATATTGCGAGCAAAATGATATTCACTCTCCTCATGTCACAGTTTATGAGTCTTTGGTTTACTCCGCATGGCTTCGCTTACCCCCTGAGGTTGATGCTGCCACCAAAATGATGTTTGTTGAAGAAGTAATGGAATTGGTGGAGTTAAAGTCACTGAGAGAAGCACTTGTTGGATTACCTGGAGTAAATGGTCTGTCTACAGAACAACGCAAGAGACTAACAATTGCAGTTGAACTTGTAGCCAACCCATCTATTATATTCATGGATGAACCGACCTCTGGCCTTGATGCTCGAGCGGCAGCTATAGTAATGAGGACAGTCAGAAGTACTGTAGACACAGGACGAACTGTAGTTTGTACAATCCACCAACCTAGCATAGATATATTTGATGCTTTTGACGAGCTACTTCTGTTGAAAAGGGGAGGCGAGGAAATTTACGCAGGACCTCTAGGCCAGCATTGTTCTCATCTTATCAATTACCTTGAGGGAATTAACGGGGTTCCCAAAATAAAGAATGGCTATAATCCTGCCACGTGGATGTTGGAGATCACCTCAGATGCACAAGAAACTTCACTTCAAGTAAACTTCGCTGAAGTATACAAGAACTCTGACCTGTATAGGAGAAACAAGGACATGATCAGAGAACTAAGCATAGCTCCACCAGGTTCTTCTGACTTGTACTTCCCAACAAAGTACTCACAATCATTCTTTAGTCAGTGTAAGGCTTGCCTTTGGAAACAACATCTGTCATATTGGCGAAATCCGCCATATACTGCAGTGAGAATTTTCTTCACAACAGTCATTGCTTTACTTTTCGGAACCATATTCTGGGACATTGGCTCCAAAAGGCAAAAGCAACAAGATCTTTTCAATGCAATGGGATCAATGTACGCTGCAATTCTGTTTATTGGGGTGCAGAATGCTTCATCAGTACAACCAGTGGTGGCCATTGAGAGGACAGTGTTTTACAGAGAGAAAGCAGCAGGAATGTACTCTGCTTTGCCATATGCATTTGGACAAGTTGCCATCGAGATCCCATACATTTTCATACAAGCTGCCATATATGGGGTCATAGTATACGCCATGATTGGATTTGAATGGACTGTCGCCAAGTTCTTCTGGTACCTCTTCTTCATGTTCTTCACCTTCCTATACTTCACCTTCTATGGAATGATGGCTGTGGCCATGACACCCGATCACAACATTGCTGCTATACTTTCCTTTGGCTTCTACTTAATGTGGAACCTTTTCTCAGGGTTCGTCATTCCCCGAACTAGGATTCCGGTATGGTGGAGATGGTACTACTGGATTTGTCCAGTTTCTTGGACCCTGTATGGATTGTTTGCCTCACAGTTTGGAGATGTGAAGGACAAAATGGAATCTGGAGAGACAGTGGAAGAGTTTTTGAGGAATTATTTTGGGTACAGGCATGATTTTCTAGGCATAGTTGCCATAGTGGTTGCCGGCATTTCAGTGTTGTTTGGACTTATCTTTGCCTTCTCAATCAAGGCATTTAATTTCCAAAAGAGATAG | 3915 | 0.4289 | MLEGFFNSLHLLPSRKKSFTILHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLAKDLKFSGRVTYNGYGMDEFVPQRTSAYISQHDLHIGEMTVRETLAFSARCQGIGSRYEMLAELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLELCADTLVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVVSLLQPAPETYEQFDDIILLSDGHIVYQGPRENVLEFFACMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYAFVTVKEFVDAFQSFHIGRKLGDELATPFDKSKGHPAALSKKKYGVSKKELLKACISREFLLMKRNSFVYIFKTQQLIVMALITMTLFLRTTMHRDTIADGGIYMGALFFVLIMIMFNGFSELSMTIAKLPVFYKQRDLLFYPSWAYALPTWILKIPITLVEVAVWVVLTYYVIGFDPNIERFFKQFFLLLCINQMASGLFRFMGAVGRNLIVANTFGSFSLLAIMVMGGFILARDDVKKWWLWGYWFSPMMYGQNALAVNEFLGNSWAHVPPNSTEPLGVQVLKSRGLFPQAYWYWIGVGASIGYMFLFNFLFALALHYLDPFEKPQAVISKEDLTEKNASRNGQVIELSSTQQRSSEKGNESRRSMSSRTLSARVGNVSEADHKRKRGMVLPFTPLCMTFDEIRYAVDMPEEMKAQGITEDRLEILKGVTGAFRPGVLTALMGISGAGKTTLMDVLAGRKTTGHIEGSISISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPPEVDAATKMMFVEEVMELVELKSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRSTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYAGPLGQHCSHLINYLEGINGVPKIKNGYNPATWMLEITSDAQETSLQVNFAEVYKNSDLYRRNKDMIRELSIAPPGSSDLYFPTKYSQSFFSQCKACLWKQHLSYWRNPPYTAVRIFFTTVIALLFGTIFWDIGSKRQKQQDLFNAMGSMYAAILFIGVQNASSVQPVVAIERTVFYREKAAGMYSALPYAFGQVAIEIPYIFIQAAIYGVIVYAMIGFEWTVAKFFWYLFFMFFTFLYFTFYGMMAVAMTPDHNIAAILSFGFYLMWNLFSGFVIPRTRIPVWWRWYYWICPVSWTLYGLFASQFGDVKDKMESGETVEEFLRNYFGYRHDFLGIVAIVVAGISVLFGLIFAFSIKAFNFQKR | 1304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5650g00068 | 1304 | Pfam | ABC-2 type transporter | 1033 | 1246 | IPR013525 | GO:0016020|GO:0140359 | |
Pral5650g00068 | 1304 | Pfam | ABC-2 type transporter | 358 | 570 | IPR013525 | GO:0016020|GO:0140359 | |
Pral5650g00068 | 1304 | Pfam | ABC transporter | 735 | 887 | IPR003439 | GO:0005524 | |
Pral5650g00068 | 1304 | Pfam | ABC transporter | 22 | 204 | IPR003439 | GO:0005524 | |
Pral5650g00068 | 1304 | Gene3D | - | 722 | 951 | IPR027417 | - | |
Pral5650g00068 | 1304 | Pfam | ABC-2 type transporter | 237 | 289 | IPR043926 | GO:0140359 | |
Pral5650g00068 | 1304 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 17 | 279 | IPR027417 | - | |
Pral5650g00068 | 1304 | Pfam | Plant PDR ABC transporter associated | 575 | 638 | IPR013581 | - | |
Pral5650g00068 | 1304 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 730 | 946 | IPR027417 | - | |
Pral5650g00068 | 1304 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 1 | 1304 | - | - | |
Pral5650g00068 | 1304 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 6 | 279 | IPR003439 | GO:0005524 | |
Pral5650g00068 | 1304 | MobiDBLite | consensus disorder prediction | 649 | 689 | - | - | |
Pral5650g00068 | 1304 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 716 | 959 | IPR003439 | GO:0005524 | |
Pral5650g00068 | 1304 | MobiDBLite | consensus disorder prediction | 649 | 665 | - | - | |
Pral5650g00068 | 1304 | FunFam | ABC transporter G family member 34 | 9 | 313 | - | - | |
Pral5650g00068 | 1304 | Gene3D | - | 8 | 315 | IPR027417 | - | |
Pral5650g00068 | 1304 | SMART | AAA_5 | 31 | 263 | IPR003593 | GO:0016887 | |
Pral5650g00068 | 1304 | SMART | AAA_5 | 744 | 936 | IPR003593 | GO:0016887 | |
Pral5650g00068 | 1304 | CDD | ABCG_PDR_domain2 | 704 | 942 | IPR034003 | - | |
Pral5650g00068 | 1304 | FunFam | ABC transporter G family member 40 | 721 | 951 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5650g00068 | Pral-Chr5650 | 302078 | 308179 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5650g00068 | 732 | 919 | Calmodulin-binding Proteins | AT2G36910 | 25.773 | 6.10e-06 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5650g00068 | K08711 | - | gmx:100804030 | 2270.35 |