Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00068 ATGTTAGAGGGTTTCTTCAACTCTTTGCATCTTCTTCCCAGTAGAAAGAAGTCATTCACAATTCTTCATGATGTTAGTGGGATCATCAAGCCTAGAAGAATGACATTGCTCTTGGGGCCTCCAAGCTCTGGAAAGACCACATTACTTCTTGCACTGGCTGGAAGACTGGCTAAAGATCTCAAATTTTCTGGGCGAGTTACGTACAACGGGTATGGCATGGATGAGTTCGTACCTCAGAGAACATCAGCGTACATAAGTCAACATGATCTCCATATAGGAGAAATGACAGTGAGAGAAACATTGGCTTTCTCAGCAAGGTGTCAAGGGATAGGAAGTCGTTATGAGATGCTGGCGGAATTATCAAGAAGAGAGAAGGCAGCGAATATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCGGCAGCACTAGAAGGCCAAGAAACCAATGTGGTTACAGATTATATTATGAAGATTTTGGGGCTAGAACTATGCGCTGATACGCTAGTAGGAGATGACATGATTCGGGGAATTTCAGGTGGGCAAAAAAAGAGAGTCACAACAGGTGAGATGCTGGTTGGACCGGCAAGAGCACTTTTTATGGATGAGATATCAACTGGTTTGGATAGTTCGACCACATTCCAAATGGTGAATTCTCTGAGACAATCAATCCACATCTTGAATGGAACCGCCGTCGTCTCTCTTCTTCAGCCAGCACCAGAAACCTATGAACAATTTGATGATATAATTCTCCTCTCTGATGGACACATCGTCTATCAAGGTCCACGGGAAAATGTGCTCGAGTTCTTTGCATGCATGGGCTTCAAATGCCCGGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTGACTTCAAGGAAAGATCAAGAACAGTACTGGGCAAATAAAGATGAGCCATATGCCTTTGTCACCGTTAAAGAATTTGTTGATGCATTTCAGTCGTTTCACATTGGTCGAAAGCTTGGTGACGAACTTGCTACTCCGTTTGACAAGTCCAAGGGCCACCCTGCTGCTTTAAGCAAGAAGAAGTACGGCGTTAGCAAGAAGGAACTACTAAAAGCCTGCATATCCAGAGAATTTTTGCTCATGAAGAGGAATTCCTTTGTCTATATTTTCAAAACACAGCAACTGATTGTGATGGCTCTCATAACAATGACACTATTTCTACGAACTACGATGCATCGGGACACAATAGCAGATGGCGGCATCTACATGGGAGCTCTGTTCTTCGTACTCATTATGATTATGTTTAATGGATTTTCGGAGCTATCCATGACCATTGCAAAACTCCCTGTCTTCTATAAGCAAAGAGACCTTCTGTTCTATCCATCTTGGGCATACGCATTGCCTACATGGATCCTTAAGATTCCTATCACCTTAGTAGAAGTTGCCGTTTGGGTGGTGTTGACTTATTATGTTATAGGCTTTGATCCAAACATCGAAAGGTTCTTCAAACAGTTCTTTTTGCTCCTGTGTATCAACCAAATGGCATCTGGGCTTTTTCGATTCATGGGAGCAGTTGGGAGGAACTTAATCGTCGCAAACACTTTTGGGTCATTCTCTTTGCTTGCGATTATGGTGATGGGTGGATTTATCCTTGCAAGAGATGACGTGAAGAAGTGGTGGTTATGGGGTTACTGGTTCTCACCCATGATGTATGGTCAGAATGCTCTAGCTGTGAATGAATTCCTCGGAAACAGCTGGGCACATGTTCCTCCTAATTCAACAGAGCCATTAGGAGTACAGGTGCTCAAGTCACGTGGACTCTTCCCTCAAGCATACTGGTATTGGATTGGAGTAGGAGCTTCCATTGGTTACATGTTCCTATTCAATTTCCTTTTCGCTTTGGCCTTGCACTATCTTGACCCATTTGAAAAACCTCAAGCAGTAATATCAAAAGAGGACTTGACTGAGAAAAATGCTAGCAGAAACGGACAGGTCATTGAACTGTCATCAACACAACAAAGGTCATCTGAAAAAGGGAATGAAAGTCGAAGAAGTATGTCATCCAGAACGCTATCTGCAAGAGTAGGTAATGTTAGCGAAGCAGATCACAAGAGGAAACGTGGGATGGTTCTTCCTTTTACTCCTCTTTGTATGACTTTTGACGAAATTAGATATGCCGTGGACATGCCAGAGGAGATGAAAGCACAAGGCATTACTGAGGATAGACTTGAAATATTGAAGGGTGTTACTGGAGCATTTAGGCCAGGAGTTCTTACAGCACTCATGGGCATAAGTGGAGCTGGAAAAACAACTTTAATGGATGTGTTGGCAGGACGAAAAACAACTGGACATATTGAGGGGTCTATTTCCATTTCAGGTTACCCCAAAAAGCAGGAGACTTTTGCTCGCATATCAGGATATTGCGAGCAAAATGATATTCACTCTCCTCATGTCACAGTTTATGAGTCTTTGGTTTACTCCGCATGGCTTCGCTTACCCCCTGAGGTTGATGCTGCCACCAAAATGATGTTTGTTGAAGAAGTAATGGAATTGGTGGAGTTAAAGTCACTGAGAGAAGCACTTGTTGGATTACCTGGAGTAAATGGTCTGTCTACAGAACAACGCAAGAGACTAACAATTGCAGTTGAACTTGTAGCCAACCCATCTATTATATTCATGGATGAACCGACCTCTGGCCTTGATGCTCGAGCGGCAGCTATAGTAATGAGGACAGTCAGAAGTACTGTAGACACAGGACGAACTGTAGTTTGTACAATCCACCAACCTAGCATAGATATATTTGATGCTTTTGACGAGCTACTTCTGTTGAAAAGGGGAGGCGAGGAAATTTACGCAGGACCTCTAGGCCAGCATTGTTCTCATCTTATCAATTACCTTGAGGGAATTAACGGGGTTCCCAAAATAAAGAATGGCTATAATCCTGCCACGTGGATGTTGGAGATCACCTCAGATGCACAAGAAACTTCACTTCAAGTAAACTTCGCTGAAGTATACAAGAACTCTGACCTGTATAGGAGAAACAAGGACATGATCAGAGAACTAAGCATAGCTCCACCAGGTTCTTCTGACTTGTACTTCCCAACAAAGTACTCACAATCATTCTTTAGTCAGTGTAAGGCTTGCCTTTGGAAACAACATCTGTCATATTGGCGAAATCCGCCATATACTGCAGTGAGAATTTTCTTCACAACAGTCATTGCTTTACTTTTCGGAACCATATTCTGGGACATTGGCTCCAAAAGGCAAAAGCAACAAGATCTTTTCAATGCAATGGGATCAATGTACGCTGCAATTCTGTTTATTGGGGTGCAGAATGCTTCATCAGTACAACCAGTGGTGGCCATTGAGAGGACAGTGTTTTACAGAGAGAAAGCAGCAGGAATGTACTCTGCTTTGCCATATGCATTTGGACAAGTTGCCATCGAGATCCCATACATTTTCATACAAGCTGCCATATATGGGGTCATAGTATACGCCATGATTGGATTTGAATGGACTGTCGCCAAGTTCTTCTGGTACCTCTTCTTCATGTTCTTCACCTTCCTATACTTCACCTTCTATGGAATGATGGCTGTGGCCATGACACCCGATCACAACATTGCTGCTATACTTTCCTTTGGCTTCTACTTAATGTGGAACCTTTTCTCAGGGTTCGTCATTCCCCGAACTAGGATTCCGGTATGGTGGAGATGGTACTACTGGATTTGTCCAGTTTCTTGGACCCTGTATGGATTGTTTGCCTCACAGTTTGGAGATGTGAAGGACAAAATGGAATCTGGAGAGACAGTGGAAGAGTTTTTGAGGAATTATTTTGGGTACAGGCATGATTTTCTAGGCATAGTTGCCATAGTGGTTGCCGGCATTTCAGTGTTGTTTGGACTTATCTTTGCCTTCTCAATCAAGGCATTTAATTTCCAAAAGAGATAG 3915 0.4289 MLEGFFNSLHLLPSRKKSFTILHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLAKDLKFSGRVTYNGYGMDEFVPQRTSAYISQHDLHIGEMTVRETLAFSARCQGIGSRYEMLAELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLELCADTLVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVVSLLQPAPETYEQFDDIILLSDGHIVYQGPRENVLEFFACMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYAFVTVKEFVDAFQSFHIGRKLGDELATPFDKSKGHPAALSKKKYGVSKKELLKACISREFLLMKRNSFVYIFKTQQLIVMALITMTLFLRTTMHRDTIADGGIYMGALFFVLIMIMFNGFSELSMTIAKLPVFYKQRDLLFYPSWAYALPTWILKIPITLVEVAVWVVLTYYVIGFDPNIERFFKQFFLLLCINQMASGLFRFMGAVGRNLIVANTFGSFSLLAIMVMGGFILARDDVKKWWLWGYWFSPMMYGQNALAVNEFLGNSWAHVPPNSTEPLGVQVLKSRGLFPQAYWYWIGVGASIGYMFLFNFLFALALHYLDPFEKPQAVISKEDLTEKNASRNGQVIELSSTQQRSSEKGNESRRSMSSRTLSARVGNVSEADHKRKRGMVLPFTPLCMTFDEIRYAVDMPEEMKAQGITEDRLEILKGVTGAFRPGVLTALMGISGAGKTTLMDVLAGRKTTGHIEGSISISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPPEVDAATKMMFVEEVMELVELKSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRSTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYAGPLGQHCSHLINYLEGINGVPKIKNGYNPATWMLEITSDAQETSLQVNFAEVYKNSDLYRRNKDMIRELSIAPPGSSDLYFPTKYSQSFFSQCKACLWKQHLSYWRNPPYTAVRIFFTTVIALLFGTIFWDIGSKRQKQQDLFNAMGSMYAAILFIGVQNASSVQPVVAIERTVFYREKAAGMYSALPYAFGQVAIEIPYIFIQAAIYGVIVYAMIGFEWTVAKFFWYLFFMFFTFLYFTFYGMMAVAMTPDHNIAAILSFGFYLMWNLFSGFVIPRTRIPVWWRWYYWICPVSWTLYGLFASQFGDVKDKMESGETVEEFLRNYFGYRHDFLGIVAIVVAGISVLFGLIFAFSIKAFNFQKR 1304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00068 1304 Pfam ABC-2 type transporter 1033 1246 IPR013525 GO:0016020|GO:0140359
Pral5650g00068 1304 Pfam ABC-2 type transporter 358 570 IPR013525 GO:0016020|GO:0140359
Pral5650g00068 1304 Pfam ABC transporter 735 887 IPR003439 GO:0005524
Pral5650g00068 1304 Pfam ABC transporter 22 204 IPR003439 GO:0005524
Pral5650g00068 1304 Gene3D - 722 951 IPR027417 -
Pral5650g00068 1304 Pfam ABC-2 type transporter 237 289 IPR043926 GO:0140359
Pral5650g00068 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 279 IPR027417 -
Pral5650g00068 1304 Pfam Plant PDR ABC transporter associated 575 638 IPR013581 -
Pral5650g00068 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 730 946 IPR027417 -
Pral5650g00068 1304 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 1304 - -
Pral5650g00068 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 6 279 IPR003439 GO:0005524
Pral5650g00068 1304 MobiDBLite consensus disorder prediction 649 689 - -
Pral5650g00068 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 716 959 IPR003439 GO:0005524
Pral5650g00068 1304 MobiDBLite consensus disorder prediction 649 665 - -
Pral5650g00068 1304 FunFam ABC transporter G family member 34 9 313 - -
Pral5650g00068 1304 Gene3D - 8 315 IPR027417 -
Pral5650g00068 1304 SMART AAA_5 31 263 IPR003593 GO:0016887
Pral5650g00068 1304 SMART AAA_5 744 936 IPR003593 GO:0016887
Pral5650g00068 1304 CDD ABCG_PDR_domain2 704 942 IPR034003 -
Pral5650g00068 1304 FunFam ABC transporter G family member 40 721 951 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral5650g00068 Pral-Chr5650 302078 308179 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00068 732 919 Calmodulin-binding Proteins AT2G36910 25.773 6.10e-06 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00068 K08711 - gmx:100804030 2270.35