Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00064 ATGGCAATCAAGAATAGGCCATTCCGCGGCATTGTCCATGATGTCAAAGGAAGAGCTGCATGCTATAAACAAGATTGGACTGGCGCATTCTGTTCTGGCGTCAAGATATTGGCTCCAACTTTCTACATGTTCTTCGCTTCTGCTCTCCCTGTCATTGCCTTTGGAGAACAACTTAATAAGGATACAGACGGAAGCTTGAGCACAGTGGAAACATTAGCATCAACTGCCATTTGCGGAATTATCCACTCCATATTTGGTGGGCAGCCTTTGTTGATCTTGGGGGTTGCTGAACCCACTATTATAATGTATGGTTATCTGTACCAGTTTTGCAAGAAGAGGCCAGAGCTGGGTGCTAATTTGTTTCTGGGTTGGGCTGGTTGGGTCTGTGTCTGGACTGGACTCATGTTGATTCTGCTTGCAATTTTCAATGCTTGCGCGGTTATCACTAGGTTTACTAGAATCGCCGGGGAATTATTTGGCATGTTAATTACTGTCCTATTCTTTCAACAAGCTATAAGGGGACTAATAGGAGAGTTTGGTGTTCCCAAGGATGTAGATCCGTCTGCGCAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTGCTTGCCATCATTTTTGCTTTTGGGTTACTTTTCACTGCCATAAAAAGTAGAAGGGCAAGGTCATGGCGATATGGAACGGGATGGCTACGAGGTCTCGTCGCAGATTATGGAGTTCCATTGATGGTTGTGCTGTGGACTCTGTTATCTTATCTTGTACCAAACAAATTGCCAGATGGAGTTCCTAGAAGGCTGTATTGTCCCCTTCCTTGGGATTCTATGTCTCTATACCACTGGACAGTGGTGAAGGATATGGTGAAGGTGCCTGTGGTTTATATTTTTGCTGCAATTGTTCCAGCTGTGATGATAGCAGGATTATACTTCTTTGATCATAGTGTAGCCTCCCAGATGTCTCAACAGAAGGAGTTCAACCTTCAAAAGCCATCAGCCTACCACTACGATATGTTCTTGCTTGGAATTTTGACTCTTATGTGTGGTCTTCTTGGGCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCGCCAATGCATACAAAAAGTCTGGCGGTTCTTAAGAGGCAGTTGATCCGAAAGAAAGTGGTACAGAGCGCCAAAGAATGCATTAAGTACCAAAGGAGCAACTCTGAGTTGGTTGGAAAGATGCAGGCAGTGTTCATAGAAATGGACACAGCCCCTACAGATAAGGAGTTAGAGACTTTAAAGGAGGCTGTGACGAAACATGAGGACATGGATGATGAAAAAGACAAATTTGACCCTGAGGTACACATAGATGCCTATTTGCCAGTTAGAGTAAACGAGCAAAGAATGAGCAATACCTTGCAGTCATTCCTTGTGGGAGCATCAATTTTTGGCATCCCCGTCATCAAAAGGATTCCGACCTCTGTTCTTTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATTCTGCTTCTCTTCATCACTCCAAGCAGGAGATACAAAATCTTGGCAGGTTCTCATGCTTCATTCGTGGAGTCAGTTCCCTTCAAGAGCATAGCTGCATTCACCGTTCTGCAGCTTGTTTATTTGGTGGTGTGCTGGGGAGCGACATGGATCCCTATAGGTGGAATATTGTTTCCACTACCTTTCTTCCTTCTCATATGCATAAGAGAGCATCTGCTTCCCAGGTTATTCGATCCCAGCCATCTTCAGGAGCTAGATGCTTCTGAGTACGAAGAAATTGCTGGTGATCCACTTGTTTCCCGGAATTTATCACTTGTGGACAAGGTTTCGGCTGATGCTAATGGTGATAAAGATTCCGAAGATTTCTATGACGCTGAGATGTTGGATGAGATGACAACCAGCAGGGGAGAGGTGAAACTCAGAACTGTAAGCTTCAATGGTAGAAACCACAGCTTCAACGATAGAAACCACAGCTTCAACGATAGAAACCTCAGCTTCAACAGTAGAAATCAAAGCTTCAACGACAGAAACCTTAGCTTCAACGGCAGAAACCAGAGCTTCACCGGTAAAAACCTCAGCTTCAATGGTAGAAGCCAGAGCCTCAACGAGGACAGACATTATTAG 2133 0.444 MAIKNRPFRGIVHDVKGRAACYKQDWTGAFCSGVKILAPTFYMFFASALPVIAFGEQLNKDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTIIMYGYLYQFCKKRPELGANLFLGWAGWVCVWTGLMLILLAIFNACAVITRFTRIAGELFGMLITVLFFQQAIRGLIGEFGVPKDVDPSAQEFQFQWLYTNGLLAIIFAFGLLFTAIKSRRARSWRYGTGWLRGLVADYGVPLMVVLWTLLSYLVPNKLPDGVPRRLYCPLPWDSMSLYHWTVVKDMVKVPVVYIFAAIVPAVMIAGLYFFDHSVASQMSQQKEFNLQKPSAYHYDMFLLGILTLMCGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKVVQSAKECIKYQRSNSELVGKMQAVFIEMDTAPTDKELETLKEAVTKHEDMDDEKDKFDPEVHIDAYLPVRVNEQRMSNTLQSFLVGASIFGIPVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILAGSHASFVESVPFKSIAAFTVLQLVYLVVCWGATWIPIGGILFPLPFFLLICIREHLLPRLFDPSHLQELDASEYEEIAGDPLVSRNLSLVDKVSADANGDKDSEDFYDAEMLDEMTTSRGEVKLRTVSFNGRNHSFNDRNHSFNDRNLSFNSRNQSFNDRNLSFNGRNQSFTGKNLSFNGRSQSLNEDRHY 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00064 710 Gene3D Helical hairpin bin 18 60 - -
Pral5650g00064 710 Pfam HCO3- transporter family 6 178 IPR011531 GO:0006820|GO:0016020
Pral5650g00064 710 Pfam HCO3- transporter family 200 374 IPR011531 GO:0006820|GO:0016020
Pral5650g00064 710 Pfam HCO3- transporter family 449 540 IPR011531 GO:0006820|GO:0016020
Pral5650g00064 710 PANTHER ANION EXCHANGE PROTEIN 5 597 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00064 Pral-Chr5650 277666 281975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00064 7 647 Antiporters AT4G32510 67.331 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00064 K24194 - gmx:100787412 1020.76