Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00063 ATGCCGGCGGTGAGTCAAAAAATGAAGTTTACCCACTCAATATTTTGCGGCAGAGGAGATGAGCAAGAGATAGAGCTTGAACACATGTCCAGGGACGAGGGCAGCCATTACAGCCTCGTCGGAGCCCCTCTTCCTTCTCTTGGCGCCAGTGCCGCTCGGACCTATCGCCGACCCAAGCTCCGATCCTGCATCATCTCTCCTTTCAACCCCCGTTACAGATGCTGGCAGACATTTCTGGTCCTTTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAATTTGGATTCCTTAATGAATCCAAGGGTCCTCTTGCCATAACAGATAATGTTGTCAACGGCTTTTTTGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTCGACAAAAGTTCTTATCTGTTTATCGACAACCCGAAAATGATTGCACTGAGATACGCCAAAACCTGGCTGTTCTTTGATGTCATCTCTACCATCCCTTTTGAACTTGCTCGTAAAGTACTGCCCACACCTCTTCAGACATATGGCCTCTTCAACATGCTGCGTCTTTGGCGTCTCCGTAGAGTCAGTGCTTTGTTTGCAAGATTGGAAAAGGACAGGAATTTTAATTACATCTGGGTCCGCTGTTCAAAGCTGATATGTGTTACAATGTTCTCAGTGCATTTTGCCGCCTGCTTTTTTTATTTTCTTGCTGCAAATCATGACATAAAAACCACATGGTTTAGCCTAGTTGCTAATGGCGACCAGATGCACCTGTGGGGACACTATGTAACATCAGTTTACTGGGCCTTGGTTACTTTGTCGACCGTTGGTTATGGTGATCTCCATCCTGTGAATACAAAGGAGATGACGTTTGACATTTTCTATATATTCTACATTCTTGGACTCAACTCATATCTTATAGGAAACATGACCAATATGGTTGTCCATCTCACAAGTCGAACGAGGACATATAGAGACACCGTTCAAGCTGCCACAGGTTTTGCACAACGGAACCAGTTACCCGTCCGCTTGCAAGAGCAGATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAGCATCAAGAGGTTATTGATGCTCTTCCAAAAGCGATTCGATCCAGCATATCACACCACCTCTTCTATTCACTTGTCGACAAAGTCTACCTGTTTCATGGCGTGTCCAATGACCTACTTTTTCAACTGGTCACAGAAATGAAAGCTGAGTACTTTCCTCCAAAGGAGGATGTCATTTTACAGAATGAAGCACCAACGGACTTCTATATACTCGTTACGGGTGCAGCTGAACTTATCATCCAAAAGAATGGTATAGAACAGGTTGTTGGTGAGGCAAAGGTAGGAGATGTGGTTGGAGAGATAGGCGTGCTATGTTACAGGCCACAACTAATTACAGTTCGAACCAAACGATTGAGCCAGCTTTTACGTCTGAATCGCACTGCGTTTATAAATCTTGCTCATTCAAATGTTGGAGATGGGACAATAATCATGAGTAATTTTCTTCAGCATTTGAAGGAATCAAGTGATCCAATAATGGAGGGAGTTTTGGCGGAAACAGAGGCGATGCTTGCTCGGGGAAGAATGGATTTGCCTATCAGTCCTTGCTTTGCTGCAAACAGAGACGATGACCTATTGCTGCATCAGTTGCTGAAGAGAGGCTCAGATCCAAATGAAGTTGATAAAAATGGAAGGACATCACTGCATATTGCCGCATCTAGAGGCAACGAACATTGTGTGGTTCTACTTCTTGAATATGGGGCTGATCCTAACAGAAAAGATTTGAATGGAAATATCCCACTATGGGAAGCAATGTTGGGAGGGCATGAATCAGTCGTAAAACTTCTCATAGACAATGGCGGGGACCTATCCTGTGCGGACGTAGGGCAGATGGCATGCTCTGCTGTGGAGCAAAACAACCTGGAATTGCTCAAAGAAATCATAAGATATGGTGGCGATGTGACGCAGCCCAGAAGCAACGGCACAACAGCACTTCACACGGCTGTATGCGATGGAAACACTGAGATAGTAAAGTTGCTTCTGCAGCAAGGAGCAGATATTGATAAGCCAGATGTTCATGGATGGACCCCCAGGACTTTGGCAGATCATCAAGGGCATGAAGATATCGTAGAGATGTTCCACAACATCCGAGAGGGCAAAAGACCACTTGTTATTCCCACGACAAAGAATGATGCCAAAACCCTCAGGAAGTTCCCAAGTGAACCAGCGACGTGTGCCCGTCAAGAAGTGACTTGGTTGGAGAATCATCCAAGGCCAAGAGCCAACCATTTTCACAATTCTTTCTTTGGCATCATGTCCGCTGCTGCTAACCGTGATCAAGCCCATGCATCATCACAAGGCAATAATGATGTTGCAGAGAACCTGAATGGATTCGCAGCCAGGATAGTTCTGAGTTGTCCAGAGAAAGGGGAACACGGTGGGAAGCTCGTGTTTCTGCCCAAGTCCCTTGAAGAACTGATAGACATGGGTGTGAAAAAGTTCGACTTTTTGGCCAACAAGATTTTGACCAGAGAAGGAGCTGAGATTGAGGATATAAGGCTTATTAGAGATGGGGATCATCTCGTTCTTGCACGTGATGGAGCTCTTGAGTCAATGGCAATACCCCATGAAGAAGGCAGGTAG 2652 0.4532 MPAVSQKMKFTHSIFCGRGDEQEIELEHMSRDEGSHYSLVGAPLPSLGASAARTYRRPKLRSCIISPFNPRYRCWQTFLVLLVFYTAWVCPFEFGFLNESKGPLAITDNVVNGFFAIDIVLTFFVAYLDKSSYLFIDNPKMIALRYAKTWLFFDVISTIPFELARKVLPTPLQTYGLFNMLRLWRLRRVSALFARLEKDRNFNYIWVRCSKLICVTMFSVHFAACFFYFLAANHDIKTTWFSLVANGDQMHLWGHYVTSVYWALVTLSTVGYGDLHPVNTKEMTFDIFYIFYILGLNSYLIGNMTNMVVHLTSRTRTYRDTVQAATGFAQRNQLPVRLQEQMLAHLFMKYRTDLEGLQHQEVIDALPKAIRSSISHHLFYSLVDKVYLFHGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYILVTGAAELIIQKNGIEQVVGEAKVGDVVGEIGVLCYRPQLITVRTKRLSQLLRLNRTAFINLAHSNVGDGTIIMSNFLQHLKESSDPIMEGVLAETEAMLARGRMDLPISPCFAANRDDDLLLHQLLKRGSDPNEVDKNGRTSLHIAASRGNEHCVVLLLEYGADPNRKDLNGNIPLWEAMLGGHESVVKLLIDNGGDLSCADVGQMACSAVEQNNLELLKEIIRYGGDVTQPRSNGTTALHTAVCDGNTEIVKLLLQQGADIDKPDVHGWTPRTLADHQGHEDIVEMFHNIREGKRPLVIPTTKNDAKTLRKFPSEPATCARQEVTWLENHPRPRANHFHNSFFGIMSAAANRDQAHASSQGNNDVAENLNGFAARIVLSCPEKGEHGGKLVFLPKSLEELIDMGVKKFDFLANKILTREGAEIEDIRLIRDGDHLVLARDGALESMAIPHEEGR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00063 883 FunFam Potassium channel KAT3 74 310 - -
Pral5650g00063 883 Pfam Ankyrin repeats (3 copies) 541 628 IPR002110 GO:0005515
Pral5650g00063 883 Pfam Ankyrin repeats (3 copies) 638 716 IPR002110 GO:0005515
Pral5650g00063 883 SMART cnmp_10 388 505 IPR000595 -
Pral5650g00063 883 SUPERFAMILY Ankyrin repeat 540 718 IPR036770 -
Pral5650g00063 883 Pfam Ion transport protein 73 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat region circular profile. 663 694 - -
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Pral5650g00063 883 ProSiteProfiles KHA domain profile. 804 883 IPR021789 -
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat region circular profile. 599 630 - -
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Pral5650g00063 883 Gene3D Jelly Rolls 353 513 IPR014710 -
Pral5650g00063 883 Gene3D - 536 718 IPR036770 -
Pral5650g00063 883 Pfam Cyclic nucleotide-binding domain 408 492 IPR000595 -
Pral5650g00063 883 SUPERFAMILY Voltage-gated potassium channels 67 309 - -
Pral5650g00063 883 PANTHER POTASSIUM CHANNEL AKT1 34 868 IPR045319 GO:0005249|GO:0006813
Pral5650g00063 883 SUPERFAMILY cAMP-binding domain-like 313 508 IPR018490 -
Pral5650g00063 883 PRINTS Ankyrin repeat signature 567 582 IPR002110 GO:0005515
Pral5650g00063 883 PRINTS Ankyrin repeat signature 679 693 IPR002110 GO:0005515
Pral5650g00063 883 FunFam Potassium channel KAT2 376 512 - -
Pral5650g00063 883 ProSiteProfiles cAMP/cGMP binding motif profile. 388 507 IPR000595 -
Pral5650g00063 883 SMART ANK_2a 663 692 IPR002110 GO:0005515
Pral5650g00063 883 SMART ANK_2a 599 628 IPR002110 GO:0005515
Pral5650g00063 883 SMART ANK_2a 696 726 IPR002110 GO:0005515
Pral5650g00063 883 SMART ANK_2a 566 595 IPR002110 GO:0005515
Pral5650g00063 883 SMART ANK_2a 630 659 IPR002110 GO:0005515
Pral5650g00063 883 Pfam KHA, dimerisation domain of potassium ion channel 804 866 IPR021789 -
Pral5650g00063 883 CDD CAP_ED 388 493 IPR000595 -
Pral5650g00063 883 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Pral5650g00063 883 PRINTS EAG/ELK/ERG potassium channel family signature 256 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5650g00063 883 PRINTS EAG/ELK/ERG potassium channel family signature 300 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5650g00063 883 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5650g00063 883 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5650g00063 883 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral5650g00063 883 Gene3D - 74 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00063 Pral-Chr5650 271601 276712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00063 20 868 Ion Channels AT4G32500 60.581 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00063 K21867 - gmx:100786870 1196.03