Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00060 ATGGCAATTGCTAATCGTGATGCACTTGGGTCTCATTTTATGATCACATTGAAAGCTGATCACCATCTTGACAGGAAGCATGTGGTCTTTGGGAAGCTTGTTCAAGGACTTAATGTATTGAAGAGAATTGAAGATGTGGGTGATGAAGATGGGCGTCCAACTGTAACTGTTAAAATCATCAATTGTGGTGAATATAATGAAGATGGAAAGAAAATGAATAAATTGACTTCTGAAACCAACAATCATGAAGCACGGAGGAAGGGAAAGCACAAAAAATCTTCAAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCATCTGAATCAGAGAGTTACTCAGATTCAGACATGGAATCATCAGAATCTGATAGTGATTCTGATTCAGATCTGTCATCATCATCTTCAATAAGTTCTTCCAGTGATGACAGGCGGAGAAAGAGAAAAAGATCTAGGAAAGACAAACATAGACGCCGAAAAAGAAGGGACAGGCGTCGTGACAAGAGGCGACGGAGACGAGATAAAAGATCAAAGCGCAGATCTAGAAGGGATTCGGACAGTGTCACTGATTCAGATAGTGAAAGCAAAAGTGACAGCAGCTCTGATGGTGAAAGTCTTGATGCCCAAGGGAAGGAGCAAGGACGCAGAGGTTATTCTCTGAAAAATGCTGAAGTTCACTCTCCTATAGCTGGGGATAGAGAAGTACATTCCATGCATCGTAGAAGGAGGGGAGTGGACACACCAGAGAATGAGGAAGCATCCCCCAAAGAAAATGGAGAACGGCATAGCAATGGTATTGGAGCTGACTCTAGATCTGATAGAAGTGGGGAGAGGCAGCCTGATGTGATGGATGATAATCCTGGCAAATCTAGGAGTCGAAGCATGAGTCCCAAGAGGACTATGAGTAAGAGTATGAGTATTAGTCCCAGGAGAAGTGAGAGCAATAGTCCAAGTCCTATTCCAGAAAGGAAGATTAGCAGAAGTCCTAGTGGTAGTAGAAGCCCTCCATCTCCGTCTAGGAGGAGTTTCAGCAGAAGCCCTGCCAGAAGCATCAGCAGAAGCCCAAGCAGAAGCATCAGCAGAAGCCCGGTGAGGGGTGCGAAGGGGAGAAGTGTCAGTAGGAGCCCTGTGAGAACCCGCTCACGTAGAAGTATCAGCAAGAGTCCAGTGAGATCCCCATCTCATAGCCGCCGGAGCAGGAGTTCAGCTAGAGTGTCATCAAGAAGATCTGTCAGCAGAAGCCCTGTAAGGGTTTCAAGGAGGAGTATAAGCAGGAGTCCAGTTAGATCTTCTGCAAGGAGCTTGAGCAGAAGCTCTGGCAGGGTTCCATCAAGGAGAGGTGTCAGCCGAAGTCCTGTGAGGGCACCTAGTAGAGGAAATCTTCGCAGCTATTCTAGGAGTCCTACTCCTGTTCGTAGGCCAAGGTCATCTCGTGGGTTGTCAAGGAGTGTGTCTCCTGACATATCCCCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAGAGATACTCTTATGCAAGAAGGTATCGAACCCCTTCTCGATCTCCTGTGAGGTCTTACCGGTACAATGGAAGAAGTGACCGGGACAGATATTCTAGTCACAGAAGGTATTCCCCTAGGCGCTACAGAAGCCCCCCACCTCGAGGAAGAACGCCACCCAGGTACCGAAGCAGAAGAAGTAGGACTCCCTCAGTATCTCGCAGTCCTCGCTACCGTGGTCGCCGCTACAGCCGGAGCATAAGCCGAAGCCCAGTTCGCAGTCGTTCCCCTGTTGAGCCATATAGATCTCGTGCTTCACCTCGCATGGCGAAGCGCAAGTTGTCATCTCGAAGTCGAAGCCGCAGTCTGTCACAATCTAGGTCTTCTGGTGAATCAGAGTCTCCTAGAAAGGCAAGTAAAGACAGGTCGAGGTCATCTTCCCAAAGCCCAGATGGAAAGAAAGGCTTGGTCTCGTATGGTGATGGCTCTCCATATTCAGACCAAAGGTGA 1986 0.4778 MAIANRDALGSHFMITLKADHHLDRKHVVFGKLVQGLNVLKRIEDVGDEDGRPTVTVKIINCGEYNEDGKKMNKLTSETNNHEARRKGKHKKSSRDRRKRRKRYYSSESESYSDSDMESSESDSDSDSDLSSSSSISSSSDDRRRKRKRSRKDKHRRRKRRDRRRDKRRRRRDKRSKRRSRRDSDSVTDSDSESKSDSSSDGESLDAQGKEQGRRGYSLKNAEVHSPIAGDREVHSMHRRRRGVDTPENEEASPKENGERHSNGIGADSRSDRSGERQPDVMDDNPGKSRSRSMSPKRTMSKSMSISPRRSESNSPSPIPERKISRSPSGSRSPPSPSRRSFSRSPARSISRSPSRSISRSPVRGAKGRSVSRSPVRTRSRRSISKSPVRSPSHSRRSRSSARVSSRRSVSRSPVRVSRRSISRSPVRSSARSLSRSSGRVPSRRGVSRSPVRAPSRGNLRSYSRSPTPVRRPRSSRGLSRSVSPDISPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYSSHRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRGRRYSRSISRSPVRSRSPVEPYRSRASPRMAKRKLSSRSRSRSLSQSRSSGESESPRKASKDRSRSSSQSPDGKKGLVSYGDGSPYSDQR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00060 661 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 63 IPR002130 GO:0000413|GO:0003755
Pral5650g00060 661 MobiDBLite consensus disorder prediction 625 640 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 67 84 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 455 483 - -
Pral5650g00060 661 Gene3D - 1 66 IPR029000 -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 404 444 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 292 360 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 67 661 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 487 507 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 144 178 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 179 200 - -
Pral5650g00060 661 MobiDBLite consensus disorder prediction 85 102 - -
Pral5650g00060 661 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 64 IPR002130 GO:0000413|GO:0003755
Pral5650g00060 661 MobiDBLite consensus disorder prediction 226 291 - -
Pral5650g00060 661 SUPERFAMILY Cyclophilin-like 1 67 IPR029000 -
Pral5650g00060 661 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00060 Pral-Chr5650 241341 246305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00060 10 60 U-box Gene Family AT5G67530 46.154 2.84e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00060 K09566 - rcu:8278566 210.69