Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00036 ATGGCAAAAGCAAACAAGTTCAGAGGTGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCATCCATTACTGAAGAGACGTGTATGGCTGGGGACTTTTGAGACGGCGGAGGCGGCGGCTAAGGCATACGATCAGGCCGCCATCTTGATGAATGGCCAAAGTGCAAAGACGAATTTCCCCACTTCAATGTATCAGCCACAAGACAACCCTGCTTCTTTATCTCCCAAGGGTCTTTCAGATCTCCTCAGCACCAAGCTTAAGAAGTGCTGCAAAGCCCCGTCTCCTTCTCTCACTTGTCTGAGGCTTGACGCTGACAATTCTCACATCGGCGTGTGGCAGAGAGGAGCCGGACCACGTTCTGACTCTAACTGGGTCGTCAGGGTGGAGCTCGGCGGCAACAAGGATCAGGCCAAGGACGAGTCCGATCCGTCGGTGATCAGGTCGTCGGTGCCGGAGACCGGTGAACAAGCAGGTAACCCGGTGGTGGATGAAGAAGACAGGGTCGCAATGCAGATGATCGAAGAGCTGCTTAACTGGAACTCTCCTTGA 558 0.5466 MAKANKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAAKAYDQAAILMNGQSAKTNFPTSMYQPQDNPASLSPKGLSDLLSTKLKKCCKAPSPSLTCLRLDADNSHIGVWQRGAGPRSDSNWVVRVELGGNKDQAKDESDPSVIRSSVPETGEQAGNPVVDEEDRVAMQMIEELLNWNSP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00036 185 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Pral5650g00036 185 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Pral5650g00036 185 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Pral5650g00036 185 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Pral5650g00036 185 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 141 - -
Pral5650g00036 185 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Pral5650g00036 185 MobiDBLite consensus disorder prediction 135 165 - -
Pral5650g00036 185 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Pral5650g00036 185 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Pral5650g00036 185 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Pral5650g00036 185 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00036 Pral-Chr5650 137423 138804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00036 1 185 AP2-EREBP Transcription Factor Family AT5G25390 60.317 1.56e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5650g00036 AP2 2.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00036 - - lang:109326202 253.832