Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5650g00023 ATGGAGCAAGTGCGATCGAGTACAAAGGAATATCTGCTTATAAAAGAAGAAGTCCGCAAGGTATTGTCGAAGGGAAAGGCAGCAGGTGTGCTTCGTCTGGTTTTCCATGACGCTGGGACCTTTGAAATGGATGATAATGCAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGATAGACCTGAAAATTCTGGACTAAAAAAATCTATAAAGGTTCTGCAAAAAGCGAAGACTCAGATAGATGCTATAAAAACAGTGTCCTGGGCAGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTTCTGTGTGTGGGGGACCAAAGATCCCAGTTTCAGTTGGCAGGCTAGATTCATTGGAGCCAGATCCGGAAGGGAAACTTCCTGAAGAATATCTTGATGCTTCTGGTTTGAAGAAATGCTTCCTGAGAAAAGGCTTTTCAACACAGGAACTAGTAGCGTTGTCTGGAGCCCACACGCTTGGTAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAACTCATATTACAAGGTTCTTCTGGAGAAGCCATGGACGTCTTCAGGCGGTATGTCAGGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATGAGGAATGTTTAAGGTGGATTAAAAAATACGCGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCGTATGTGAAGCTGGTGAATACTGGTGCGAGGTGGAAAAGCTTGTAA 729 0.4362 MEQVRSSTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEMDDNAGGMNGSIVYELDRPENSGLKKSIKVLQKAKTQIDAIKTVSWADMIAVAGAEAVSVCGGPKIPVSVGRLDSLEPDPEGKLPEEYLDASGLKKCFLRKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWTSSGGMSGMIGLPSDHALVEDEECLRWIKKYADNENMFFEDFKNAYVKLVNTGARWKSL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5650g00023 242 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 10 241 IPR044831 GO:0004601|GO:0034599
Pral5650g00023 242 Gene3D Peroxidase, domain 2 127 229 - -
Pral5650g00023 242 ProSitePatterns Peroxidases active site signature. 27 38 IPR019794 GO:0004601
Pral5650g00023 242 Gene3D - 15 236 - -
Pral5650g00023 242 SUPERFAMILY Heme-dependent peroxidases 24 238 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 FunFam Adenylate/guanylate cyclase 127 229 - -
Pral5650g00023 242 PRINTS Haem peroxidase superfamily signature 86 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Haem peroxidase superfamily signature 27 41 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Haem peroxidase superfamily signature 104 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 Pfam Peroxidase 16 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 104 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 125 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 143 164 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 85 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 45 55 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 27 42 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 PRINTS Plant ascorbate peroxidase signature 213 237 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5650g00023 242 FunFam L-ascorbate peroxidase 17 134 - -
Pral5650g00023 242 ProSitePatterns Peroxidases proximal heme-ligand signature. 149 159 IPR019793 -
Pral5650g00023 242 ProSiteProfiles Plant heme peroxidase family profile. 27 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5650g00023 Pral-Chr5650 112223 116887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5650g00023 27 232 Peroxidase AT4G16270 31.439 9.76e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5650g00023 K00434 - gmx:100792735 414.461