Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5648g00010 ATGGCAAATCTTGCTCCAAAAACCAAGGTCCGTCGAGATGGAGCATTTGTTGAGCAAGACGCTGCTATATTAGTGCCGGGAGATATTATCAGCATCAAGCTTGGAGACATTATCCCTGCAGATGCTCGTCTCTTGGAAGGTGATCCTCTCAAGATTGATCAGTCTGCACTTACTGGTGAATCATTGCCCGTCTCAAAGAATCCAGGTGATGAAGTTTTCTCTGGCTCCACTGTTAAGCAAGGTGAGATTGAAGCTATTGTGATTGCCACTGGGGTACACACCTTCTTTGGTAAGGCTGCTCACTTAGTGGATAGCACCAACCAAGTAGGACACTTCCAAAAGGTGTTGACAGCAATTGGAAACTTCTGTATTTGCTCCATTGCTGTGGGGATCATTGTGGAAATTGTTGTCATGTACCCTATTCAGCACCGCAGGTATAGGGATGGGATTGATAATCTCTTGGTGCTTCTCATTGGAGGGATTCCCATTGCCATGCCAACTGTCTTGTCTGTAACAATGGCTATTGGTTCGCATCGCCTTTCTCAGCAAGGAGCCATCACCAAGAGGATGACTGCCATTGAGGAAATGGCAGGCATGGATGTTTTATGTAGTGACAAGACTGGCACTCTAACATTGAACAAGCTCACAGTTGACAAGGCCCTAGTTGAGGTTTTCGAAAAAGATATCGACAAAGACATGTTAATTTTGCTTGGAGCTAGGGCCTCTAGAGTGGAGAACCAGGATGCTATTGATGCTTGCATTGTTGGGATGTTGGGCGACCCGAAGGAGGCTAGAGATGGAATCCAAGAGGTGCATTTCCTTCCCTTCAATCCAGTGGACAAGCGTACAGCCATAACTTACATTGACTCTGCAGGCAATTGGCACAGAGTTAGCAAAGGTGCTCCAGAGCAGATCATAACACTCTGCAATCTCCGGGGTGATGTGCTGAAGAGAGCTCATGCCATTATTGATAAGTTTGCCGAGCGTGGTCTTCGATCTCTTGCTGTTGCTAGACAAGAAGTGCCGGAGAAGACAAAGGAAAGTGCAGGAGGACCATGGCATTTTGTGGGTCTCTTGCCTCTCTTTGATCCACCTAGACATGATAGTGCAGAGACCATCAGAAAGGCTCTCGGACTCGGAGTGAATGTGAAGATGATTACCGGTGACCAATTGGCTATTGGTAAAGAGACAGGTCGCAGGCTTGGCATGGGAAGCAACATGTACCCTTCTTCCTCTCTCCTTGGTGACCACAAGGATGAGTCCATTGCTGCTCTTCCTATTGATGAGCTTATTGAAAAGGCTGATGGGTTTGCTGGCGTCTTTCCTGAGCACAAGTACGAGATTGTCAAGAGGCTGCAAGATAGGCATCACATTTGTGGGATGACTGGAGATGGTGTGAATGACGCACCGGCCTTGAAGAAAGCAGATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGCTCGAAGTGCGTCTGACATAGTCCTGACAGAACCAGGTTTGAGTGTGATTATAAGTGCAGTGTTAACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACCATTTATGCCGTCTCCATAACAATTCGTATTGTTTTGGGATTTATGCTCCTTGCTCTTATATGGAAATTTGATTTCTCACCTTTCATGGTACTGATCATTGCTATCCTCAATGATGGGACCATCATGACCATTTCCAAGGACAGAGTCAAGCCATCTCCAATTCCTGATTCCTGGAAGCTCAATGAGATTTTTGCTACTGGCATTGTCCTTGGTGCTTACCTTGCTGTTATGACTGTTGTCTTCTTTTGGGCTGCTCACGCATCTGATTTCTTCACAGAACATTTTGGAGTTAGATCTATCAGGCACAGCAATGATGAGCTTACTGCAGCTGTTTACCTTCAAGTGAGTATAGTGAGTCAAGCTCTCATCTTTGTCACTCGTTCAAGGAGCTGGTCATATGTTGAACGTCCTGGTCTTTACCTTGTTGGAGCCTTTTTCTTAGCACAATTGATTGCGACCTTATTAGCCGTGTATGCAAACTGGGGCTTTGCAAGGATTAAAGGAATTGGGTGGGGCTGGGCTGGTGTGATTTGGCTCTACAGCATCATCTTCTACATTCCTTTAGACATCATAAAGTTCATCATCCGATATGCATTGAGCGGCAAGGCCTGGAATAACATTACTGAGACCAGGACTGCTTTCACAACCAAGAAAGACTATGGAAGGGGTGAGAGAGAAGCACAGTGGGCTGCAGATCAACGCACAATGCACGGATTGAATCCTCCTGAAGCAGATGATATCTTGAAGGACAAGACAGATTACAGAGAACTCACTGAAATTGCAGAACAAGCAAGGAAACGTGCAGAAGTTGCAAGGTTGAGGGAGCTTCACACACTGAAAGGGCATGTGGAGTCTGTGGTGAAGCTGAAGGGACTTGATATTGAAACAATTCAGCAGCACTACACTGTGTGA 2478 0.46 MANLAPKTKVRRDGAFVEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKNPGDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIIVEIVVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALVEVFEKDIDKDMLILLGARASRVENQDAIDACIVGMLGDPKEARDGIQEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIITLCNLRGDVLKRAHAIIDKFAERGLRSLAVARQEVPEKTKESAGGPWHFVGLLPLFDPPRHDSAETIRKALGLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGDHKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRHHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLNEIFATGIVLGAYLAVMTVVFFWAAHASDFFTEHFGVRSIRHSNDELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGLYLVGAFFLAQLIATLLAVYANWGFARIKGIGWGWAGVIWLYSIIFYIPLDIIKFIIRYALSGKAWNNITETRTAFTTKKDYGRGEREAQWAADQRTMHGLNPPEADDILKDKTDYRELTEIAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5648g00010 825 SFLD p-type atpase 185 513 IPR044492 -
Pral5648g00010 825 ProSitePatterns E1-E2 ATPases phosphorylation site. 205 211 IPR018303 -
Pral5648g00010 825 Gene3D - 6 90 - -
Pral5648g00010 825 SUPERFAMILY Calcium ATPase, transduction domain A 6 103 IPR008250 -
Pral5648g00010 825 FunFam Plasma membrane ATPase 356 510 - -
Pral5648g00010 825 CDD P-type_ATPase_H 1 715 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral5648g00010 825 Gene3D - 200 499 IPR023214 -
Pral5648g00010 825 SUPERFAMILY HAD-like 199 509 IPR036412 -
Pral5648g00010 825 Gene3D - 215 362 IPR023299 GO:0000166
Pral5648g00010 825 SFLD C1.7: P-type atpase like 185 513 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 357 368 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 203 217 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 53 67 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 462 481 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 379 389 - -
Pral5648g00010 825 PRINTS P-type cation-transporting ATPase superfamily signature 485 497 - -
Pral5648g00010 825 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 721 IPR023298 -
Pral5648g00010 825 FunFam ATPase 4 plasma membrane-type 448 689 - -
Pral5648g00010 825 Gene3D - 774 825 - -
Pral5648g00010 825 PRINTS H+-transporting ATPase (proton pump) signature 319 337 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 PRINTS H+-transporting ATPase (proton pump) signature 462 478 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 PRINTS H+-transporting ATPase (proton pump) signature 634 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 PRINTS H+-transporting ATPase (proton pump) signature 493 518 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 PRINTS H+-transporting ATPase (proton pump) signature 434 450 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 FunFam Plasma membrane ATPase 6 90 - -
Pral5648g00010 825 Pfam haloacid dehalogenase-like hydrolase 199 476 - -
Pral5648g00010 825 Gene3D - 2 689 - -
Pral5648g00010 825 FunFam Plasma membrane ATPase 215 362 - -
Pral5648g00010 825 NCBIfam plasma-membrane proton-efflux P-type ATPase 2 680 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral5648g00010 825 Coils Coil 776 796 - -
Pral5648g00010 825 PANTHER CALCIUM-TRANSPORTING ATPASE 1 757 - -
Pral5648g00010 825 NCBIfam HAD-IC family P-type ATPase 437 547 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 NCBIfam HAD-IC family P-type ATPase 6 223 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00010 825 Pfam E1-E2 ATPase 4 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5648g00010 Pral-Chr5648 99279 102894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5648g00010 6 825 Primary Pumps ATPases AT3G42640 83.171 0.0 1426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5648g00010 K01535 - gmx:100782329 1454.5