Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5648g00009 ATGGCAAATCTTGCTCCAAAAACCAAGGTCCGTCGAGATGGAGCATTTGTTGAGCAAGACGCTGCTATATTAGTGCCGGGAGATATTATCAGCATCAAGCTTGGAGACATTATCCCTGCAGATGCTCGTCTCTTGGAAGGTGATCCTCTCAAGATTGATCAGTCTGCACTTACTGGTGAATCATTGCCCGTCTCAAAGAATCCAGGTGATGAAGTTTTCTCTGGCTCCACTGTTAAGCAAGGTGAGATTGAAGCTATTGTGATTGCCACTGGGGTACACACCTTCTTTGGTAAGGCTGCTCACTTAGTGGATAGCACCAACCAAGTGTTGACAGCAATTGGAAACTTCTGTATTTGCTCCATTGCTGTGGGGATCATTGTGGAAATTGTTGTCATGTACCCTATTCAGCACCGCAGGTATAGGGATGGGATTGATAATCTCTTGGTGCTTCTCATTGGAGGGATTCCCATTGCCATGCCAACTGTCTTGTCTGTAACAATGGCTATTGGTTCGCATCGCCTTTCTCAGCAAGGAGCCATCACCAAGAGGATGACTGCCATTGAGGAAATGGCAGGCATGGATGTTTTATGTAGTGACAAGACTGGCACTCTAACATTGAACAAGCTCACAGTTGACAAGGCCCTAGTTGAGGTTTTCGAAAAAGATATCGACAAAGACATGTTAATTTTGCTTGGAGCTAGGGCCTCTAGAGTGGAGAACCAGGATGCTATTGATGCTTGCATTGTTGGGATGTTGGGCGACCCGAAGGAGGCTAGAGATGGAATCCAAGAGGTGCATTTCCTTCCCTTCAATCCAGTGGACAAGCGTACAGCCATAACTTACATTGACTCTGCAGGCAATTGGCACAGAGTTAGCAAAGGTGCTCCAGAGCAGATCATAACACTCTGCAATCTCCGGGGTGATGTGCTGAAGAGAGCTCATGCCATTATTGATAAGTTTGCCGAGCGTGGTCTTCGATCTCTTGCTGTTGCTAGACAAGAAGTGCCGGAGAAGACAAAGGAAAGTGCAGGAGGACCATGGCATTTTGTGGGTCTCTTGCCTCTCTTTGATCCACCTAGACATGATAGTGCAGAGACCATCAGAAAGGCTCTCGGACTCGGAGTGAATGTGAAGATGATTACCGGTGACCAATTGGCTATTGGTAAAGAGACAGGTCGCAGGCTTGGCATGGGAAGCAACATGTACCCTTCTTCCTCTCTCCTTGGTGACCACAAGGATGAGTCCATTGCTGCTCTTCCTATTGATGAGCTTATTGAAAAGGCTGATGGGTTTGCTGGCGTCTTTCCTGAGCACAAGTACGAGATTGTCAAGAGGCTGCAAGATAGGCATCACATTTGTGGGATGACTGGAGATGGTGTGAATGACGCACCGGCCTTGAAGAAAGCAGATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGCTCGAAGTGCGTCTGACATAGTCCTGACAGAACCAGGTTTGAGTGTGATTATAAGTGCAGTGTTAACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACCATTTATGCCGTCTCCATAACAATTCGTATTGTTTTGGGATTTATGCTCCTTGCTCTTATATGGAAATTTGATTTCTCACCTTTCATGGTACTGATCATTGCTATCCTCAATGATGGGACCATCATGACCATTTCCAAGGACAGAGTCAAGCCATCTCCAATTCCTGATTCCTGGAAGCTCAATGAGATTTTTGCTACTGGCATTGTCCTTGGTGCTTACCTTGCTGTTATGACTGTTGTCTTCTTTTGGGCTGCTCACGCATCTGATTTCTTCACAGAACATTTTGGAGTTAGATCTATCAGGCACAGCAATGATGAGCTTACTGCAGCTGTTTACCTTCAAGTGAGTATAGTGAGTCAAGCTCTCATCTTTGTCACTCGTTCAAGGAGCTGGTCATATGTTGAACGTCCTGGTCTTTACCTTGTTGGAGCCTTTTTCTTAGCACAATTGATTGCGACCTTATTAGCCGTGTATGCAAACTGGGGCTTTGCAAGGATTAAAGGAATTGGGTGGGGCTGGGCTGGTGTGATTTGGCTCTACAGCATCATCTTCTACATTCCTTTAGACATCATAAAGTTCATCATCCGATATGCATTGAGCGGCAAGGCCTGGAATAACATTACTGAGACCAGGACTGCTTTCACAACCAAGAAAGACTATGGAAGGGGTGAGAGAGAAGCACAGTGGGCTGCAGATCAACGCACAATGCACGGATTGAATCCTCCTGAAGCAGATGATATCTTGAAGGACAAGACAGATTACAGAGAACTCACTGAAATTGCAGAACAAGCAAGGAAACGTGCAGAAGTTGCAAGGTTGAGGGAGCTTCACACACTGAAAGGGCATGTGGAGTCTGTGGTGAAGCTGAAGGGACTTGATATTGAAACAATTCAGCAGCACTACACTGTGTGA 2460 0.4602 MANLAPKTKVRRDGAFVEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKNPGDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVLTAIGNFCICSIAVGIIVEIVVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALVEVFEKDIDKDMLILLGARASRVENQDAIDACIVGMLGDPKEARDGIQEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIITLCNLRGDVLKRAHAIIDKFAERGLRSLAVARQEVPEKTKESAGGPWHFVGLLPLFDPPRHDSAETIRKALGLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGDHKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRHHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLNEIFATGIVLGAYLAVMTVVFFWAAHASDFFTEHFGVRSIRHSNDELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGLYLVGAFFLAQLIATLLAVYANWGFARIKGIGWGWAGVIWLYSIIFYIPLDIIKFIIRYALSGKAWNNITETRTAFTTKKDYGRGEREAQWAADQRTMHGLNPPEADDILKDKTDYRELTEIAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5648g00009 819 Gene3D - 209 356 IPR023299 GO:0000166
Pral5648g00009 819 Gene3D - 768 819 - -
Pral5648g00009 819 CDD P-type_ATPase_H 1 709 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral5648g00009 819 NCBIfam plasma-membrane proton-efflux P-type ATPase 2 674 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pral5648g00009 819 SUPERFAMILY Calcium ATPase, transduction domain A 6 103 IPR008250 -
Pral5648g00009 819 PANTHER CALCIUM-TRANSPORTING ATPASE 1 751 - -
Pral5648g00009 819 ProSitePatterns E1-E2 ATPases phosphorylation site. 199 205 IPR018303 -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 53 67 - -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 197 211 - -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 373 383 - -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 479 491 - -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 351 362 - -
Pral5648g00009 819 PRINTS P-type cation-transporting ATPase superfamily signature 456 475 - -
Pral5648g00009 819 Gene3D - 6 90 - -
Pral5648g00009 819 FunFam Plasma membrane ATPase 209 356 - -
Pral5648g00009 819 FunFam Plasma membrane ATPase 350 504 - -
Pral5648g00009 819 FunFam ATPase 4 plasma membrane-type 442 683 - -
Pral5648g00009 819 Pfam E1-E2 ATPase 4 176 - -
Pral5648g00009 819 SFLD p-type atpase 179 507 IPR044492 -
Pral5648g00009 819 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 715 IPR023298 -
Pral5648g00009 819 Pfam haloacid dehalogenase-like hydrolase 193 470 - -
Pral5648g00009 819 Gene3D - 194 493 IPR023214 -
Pral5648g00009 819 SUPERFAMILY HAD-like 193 503 IPR036412 -
Pral5648g00009 819 FunFam Plasma membrane ATPase 6 90 - -
Pral5648g00009 819 SFLD C1.7: P-type atpase like 179 507 - -
Pral5648g00009 819 PRINTS H+-transporting ATPase (proton pump) signature 456 472 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 PRINTS H+-transporting ATPase (proton pump) signature 313 331 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 PRINTS H+-transporting ATPase (proton pump) signature 487 512 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 PRINTS H+-transporting ATPase (proton pump) signature 628 649 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 PRINTS H+-transporting ATPase (proton pump) signature 428 444 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 NCBIfam HAD-IC family P-type ATPase 6 217 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 NCBIfam HAD-IC family P-type ATPase 431 541 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral5648g00009 819 Gene3D - 2 683 - -
Pral5648g00009 819 Coils Coil 770 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5648g00009 Pral-Chr5648 99279 102894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5648g00009 6 819 Primary Pumps ATPases AT3G42640 82.439 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5648g00009 K01535 - gmx:100818997 1436.78