Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5648g00004 ATGGGTGTGTGTTGTTTTCACCCTAATTACTCACGGATCACTGTGCCTGTATCTTTGTTTGTTTTCAAGGAAACGGAAAATGACTATATTTCCTGGGGAACGAACTCAGATCATAATGAAGAAGCGGAGTATTTGCTTAGAGATATCCTCCAGGACCCGACTAATCTATCTTCAGAAAGTGAAGCCATTTTGCCTCCCACCACTGTGGCGGACGGCGGTGCCACCACCGGCAATTTAGCCAACTCCAACTCCGTCGTTAACTCTCAACATTTAGCTTCTGAAACAACAACCCCGACCGCCTGCGTTCTGTCTTTCGAGAAATCCGTTGTGATTCCAGATATCCCAGACCCCAGTTATAATCATTCGCACCAGAGCAAGGATGTCCGTAGTTATTCCTTGAAGCCCAAACGGACCATTGAAATGCTTAACGATGAACCATCGATGAACAGAGGAACAAAGAAATCCAGAAGCGGTGCTGGGGCAATGGATCACATAATGGCTGAGAGAAGAAGGAGGCAGGAGCTCACAGAAAAGTTCATAGCACTTTCGGCCACCATCCCTGGCTTGAAAAAGATTGACAAGGCGTCTATACTGAGCGAAGCAATAAGCACGCCGGCGTCGAGTGAAGTGAACTCCGGCGACAGGTACACACCCATCAACGATGTACTCCCCGATGTCAAAGCAAGAATGTCCGACGACAAACAAGTGCTCATCAGAATCCTCTGCAAGAAACAGGACTGCATAATGCTTAAAATACTTGATGAGCTCAAAAATCTTAACCTCAACGTCTTTGGTAACAGTGTTATTCCATTTGGCTCCTCTACTCTTGATGTTACCGTTGTTGCTCAGATGAGTGAGGACTACAGTGTATCGGTGAAGGATGTCGTGAAAAGCCTGAGAATAGCTCTCTGTTGA 915 0.4634 MGVCCFHPNYSRITVPVSLFVFKETENDYISWGTNSDHNEEAEYLLRDILQDPTNLSSESEAILPPTTVADGGATTGNLANSNSVVNSQHLASETTTPTACVLSFEKSVVIPDIPDPSYNHSHQSKDVRSYSLKPKRTIEMLNDEPSMNRGTKKSRSGAGAMDHIMAERRRRQELTEKFIALSATIPGLKKIDKASILSEAISTPASSEVNSGDRYTPINDVLPDVKARMSDDKQVLIRILCKKQDCIMLKILDELKNLNLNVFGNSVIPFGSSTLDVTVVAQMSEDYSVSVKDVVKSLRIALC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5648g00004 304 Gene3D - 154 207 IPR036638 GO:0046983
Pral5648g00004 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 208 IPR011598 GO:0046983
Pral5648g00004 304 Pfam Helix-loop-helix DNA-binding domain 164 202 IPR011598 GO:0046983
Pral5648g00004 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 203 IPR036638 GO:0046983
Pral5648g00004 304 SMART finulus 165 214 IPR011598 GO:0046983
Pral5648g00004 304 PANTHER BHLH TRANSCRIPTION FACTOR 67 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5648g00004 Pral-Chr5648 55497 56742 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5648g00004 150 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.897 7.59e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5648g00004 HLH 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5648g00004 - - aprc:113856039 182.185