Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5648g00003 ATGGACAAGGCGACTGTACTTGGCGAGGCGATCGATTACGTGAAGCGACTTCAAGAGCGAGTGAGAGAGCTGGAGAATAATGAAAAGAAGAGGAAAAGAAGAGGAGGAGGAGGAAGAGTGAGGAAAGAGAAAACCTCAACGGAGAAGTGTTGGTGTTGCAGAGCCCAGGAAGCGGTTGAGGTTCCAGAAATGGAAGTGAGGGTTCTGGAGAATGAAGTTCTGGTTCGGGTTCAGTGCGAGGGCCGACGAGATATGATGCGGAAGACGGTGGAACTCCTTGAACACGTTCATCTCCCTGTCTCATGCTGTAACTCTCTGGCTTTTGGAAACTCTGCTTTGAGCATCACCATGGTCGCTCAGATGAAGGACCAATACAAGATGAAGGTGAATGATTTAATCAAGTATTTGAGGCAACATCTGTTCGAATCCCAGGATGTTCGGTAG 444 0.4842 MDKATVLGEAIDYVKRLQERVRELENNEKKRKRRGGGGRVRKEKTSTEKCWCCRAQEAVEVPEMEVRVLENEVLVRVQCEGRRDMMRKTVELLEHVHLPVSCCNSLAFGNSALSITMVAQMKDQYKMKVNDLIKYLRQHLFESQDVR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5648g00003 147 Coils Coil 7 34 - -
Pral5648g00003 147 Gene3D - 1 35 IPR036638 GO:0046983
Pral5648g00003 147 PANTHER BHLH TRANSCRIPTION FACTOR 1 142 - -
Pral5648g00003 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 30 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5648g00003 Pral-Chr5648 37013 37557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5648g00003 1 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.562 9.41e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5648g00003 - - gmx:100794354 97.8265