Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5648g00002 ATGGATGGTCAGGGTTTCTTCGATGAGGACGAGTTCTTGAGCGACGACATCTGTCACCAAGCAGAAAGCGGTCTCTGTCCTCAAGTCGAATCAGACCATAACTCCTCCTCCTCCTACGCCGCCGACGCCGTCGCAGATGCCGTCAACAACACATCCTTCACCCACAATAATGATGGCTTCCCCGCAAGCACTGGCGCCAACTCATTCTTCAACGATCCCAAGCACCCCGCCGTTTCAGCCTTCACTCTGTCTTTTGATAAATCCACCATCATCCCCATCACAGACGAACCTCCATGTCTCGCCAGAACTTCCTCTCCGCCATCGAAACGACAGCGAGCGATTCGCAGCGCTGAACACCGAAACAAGTCCAGATCCTCCTCTGAAGTCATTCATCACATTATGACCGAGAGGAGAAGAACACAGGACCTCACTCAAAAGTTCATAGCACTCGCCGCCACCATCCCCGGTTTGAAGAAGGTCACTTAG 486 0.5288 MDGQGFFDEDEFLSDDICHQAESGLCPQVESDHNSSSSYAADAVADAVNNTSFTHNNDGFPASTGANSFFNDPKHPAVSAFTLSFDKSTIIPITDEPPCLARTSSPPSKRQRAIRSAEHRNKSRSSSEVIHHIMTERRRTQDLTQKFIALAATIPGLKKVT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5648g00002 161 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 158 IPR036638 GO:0046983
Pral5648g00002 161 MobiDBLite consensus disorder prediction 96 127 - -
Pral5648g00002 161 MobiDBLite consensus disorder prediction 112 127 - -
Pral5648g00002 161 PANTHER BHLH TRANSCRIPTION FACTOR 30 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5648g00002 Pral-Chr5648 36453 36938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5648g00002 79 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 36.667 1.19e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5648g00002 - - gmx:100809422 85.1149