Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5647g00005 ATGGAGGGATCTGGAGAGAATTGGCCCCATTATCAGACGGACATTAATGCAAACCTGGAGAAGGCGATTAACTATATGAGCTATCTGGAGGGGCGAGTGAGAGAGCTCGAGAAGCAGAACAAGACAAGTGCGGCGGAGACGTCCGGAGGTTATAACAACAACAACTACGACGATGGCGCGTCGTCGTCGTGCTGTGAGACCGGCGGCGGCGGCGAGTGGTATGAGGCGTCGCTGCCTGAGGTGAAAGCTAGGGTTTCCGAGAACGAGGTGCTGATAATAATTCACTGTGAGAAACAAAAGGGCATTATGCATAAAATAATGTCTCAGCTTGAAGCTCTTAATCTCTCTGTTATCAGTAGCAGCGTTTTGCCGTTTGGGAAATTCACCCTTGACATCACCATTGTTGCTCAGATGGGGGAGGAATTCAACTTGACGGTGAGTGGCATAGTGAAAAGCCTGAGACGAGCTATCTCCAAGTAA 480 0.4958 MEGSGENWPHYQTDINANLEKAINYMSYLEGRVRELEKQNKTSAAETSGGYNNNNYDDGASSSCCETGGGGEWYEASLPEVKARVSENEVLIIIHCEKQKGIMHKIMSQLEALNLSVISSSVLPFGKFTLDITIVAQMGEEFNLTVSGIVKSLRRAISK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5647g00005 159 Coils Coil 19 39 - -
Pral5647g00005 159 PANTHER BHLH TRANSCRIPTION FACTOR 19 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5647g00005 Pral-Chr5647 20457 21838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5647g00005 22 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.553 6.41e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5647g00005 - - pcin:129290132 239.195