Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5644g00037 ATGGAAGATGCCTCCATCTGCCATGAGCAAGTGCCAGATAGTGAATGCATTGAGGATCAGAAAGAATGTGGTGTAATAGCTGAATTAGATGGTCAGAATGGTTTTTCTGAAGGAAGAAAGGAATTTGTGGCACCTGCTGTTGGGATGGAGTTTGAGTCCTATGATGACGCCTACAATTATTATATCTGCTACGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAAAATTCATGGTTCAAGCGGAATAGCAGGGAAAAGTATGGTGCAGTTCTATGCTGTAGTAGTCAGGGTTTTAAAAGAATAAAAGATGTCAACCATTTAAGAAAGGAAACAAGAACTGGTTGCCCTGCAATGATAAGGATGAGGCTAGTGGACTCGCAGAGATGGAGGATACTTGAGGTTACACTTGAACATAACCACCTTTTAGGTGCTAAGTTATACAGATCAATTAAGAAGATGGGAACTGGAACCAAATGGAAACCCCCGCCTGGTTCTGATAATGAAGTGCGAACAATCAAGTTATATAGGGCACTTGTGATAGATGCAGGTGGTGATGTTAATGCAAACTCAAGTACCAGAGCATTCAGGACTTCTTTGGAATCGTCCTCTAAGTTGAGCCTTAAAAAAGGTGACACGCAGGCCATTTATAACTACTTTTGTCGCATGCAACTGACCAATCCAAATTTCTTTTACTTGATGGATTTTAATGAGGAAGGACTGTTGAGAAATGTATTTTGGGCTGATGCTAGGTCTAGGGCTTCCTGTGGCTATTTTGGTGATGTTATTTATTTTGACAACTCGTATTTGTCAAACAAATATGAAATCCCTCTTGTGGCATTTGTTGGAATTAATCACCATGGTCAATCAGTGTTACTGGGTTGCGGTCTACTCGCTGGTGAAACATTAGAATCATACATATGGTTATTCAGAACATGGGCTACGTGCATGCCAGGATCTCTTCCCCAAACTGTCATCACTGATAGGTGCAAGGCTTTGCAGAGTGCTATTGCAGAAGTTTTTCCTAGGACACGTCATTGTTTTGGCTTGTCACTAATCATGAAAAGAGTACCGGAGAAGTTAGGAGGGTTGCGTAATTATGATGCAATCAGGAAAGCCTTGAGTAAAGCTGTTTATGAGACGATGAAAGTAATTGAATTTGAAGCAGCTTGGGGATTTATGATTCAGCGATTTGGAATTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACCGAGTTCATTGGGCTCCAGTATTCTTGAAGGACACATTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAGACCTTGAGTCCTTTTTTTGAGAAATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATAAGAAGCACAAGGAAGAATCTGCTGCTGACATTGACTCTAGAAGCTCTACTCCCTTGCTGAAAACAAGATGTTCCTTTGAATTGCAGCTATCCAGAATATACACACGAGAAATATTCATGAAGTTCCAATACGAAGTTGAAGAAATGTACTCTTGTTTTAGTACCACACAGTTACATGTGGATGGTCCGATTATAATTTTTTTAGTCAAGGATCGTGTTTTAAGTGAAGGAAATAGAAGGGAGATCAAGGACTTTGAAGTCTTGTACAACAGGACAGCCAGCGAAGTTCGCTGCATCTGTAGCTGCTTTAACTTCAATGGGTATTTATGTAGGCATGCACTGTGTGTGCTCAATTTTAATGGGGTGGAGGAGATACCTTCCAGATACATACTTTCCAGATGGAAAAAAGATTATAAGCGCCTGCATGTTCCTGATCGCAACTCTGGTATTGTCGATGAGACTGACCGCATTCAATGGTTTAATCAGTTATTTAGAAGCTCCTTGCAAGTTGTCGAGGAAGGGGCAATTTCTCTAGACCACTATAATGTAGCTTTGCATGCTTTTCAGGAATCATTGAGTAGGATACATGATGTAGAACAGAGACAGGAGTAA 2001 0.4083 MEDASICHEQVPDSECIEDQKECGVIAELDGQNGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVDSQRWRILEVTLEHNHLLGAKLYRSIKKMGTGTKWKPPPGSDNEVRTIKLYRALVIDAGGDVNANSSTRAFRTSLESSSKLSLKKGDTQAIYNYFCRMQLTNPNFFYLMDFNEEGLLRNVFWADARSRASCGYFGDVIYFDNSYLSNKYEIPLVAFVGINHHGQSVLLGCGLLAGETLESYIWLFRTWATCMPGSLPQTVITDRCKALQSAIAEVFPRTRHCFGLSLIMKRVPEKLGGLRNYDAIRKALSKAVYETMKVIEFEAAWGFMIQRFGICDHEWLRSIYEDRVHWAPVFLKDTFFAGMSAASPGETLSPFFEKYVHKQTPLKEFLDKYELALHKKHKEESAADIDSRSSTPLLKTRCSFELQLSRIYTREIFMKFQYEVEEMYSCFSTTQLHVDGPIIIFLVKDRVLSEGNRREIKDFEVLYNRTASEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHVPDRNSGIVDETDRIQWFNQLFRSSLQVVEEGAISLDHYNVALHAFQESLSRIHDVEQRQE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5644g00037 666 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Pral5644g00037 666 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
Pral5644g00037 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 660 IPR031052 GO:0006355
Pral5644g00037 666 SMART 26again6 559 586 IPR006564 GO:0008270
Pral5644g00037 666 Pfam MULE transposase domain 261 354 IPR018289 -
Pral5644g00037 666 Pfam SWIM zinc finger 557 580 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5644g00037 Pral-Chr5644 216358 219321 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5644g00037 MULE 6.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5644g00037 - K17604 gmx:100796448 1135.17