Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5644g00034 ATGGCCATTGTTTCTTTCTCTTTTCGACCTTATTTGCATCTCCCCTCCGCTCCTTCGTCGTCGTCGTCGTCTTCCTCCTCCTCCTCCTTTTTATGTGGTGGTGTCCACCTTCGGACCCATAAGAACTTCATCTCTATCCATTCACCTTCCCATTTTTCTTCCTCGACATTAAATAGTAGGTCCTCCTCGAGGAGCTTTCGAACGGCGATTGCTGCTTCTGGCGACTATTATGCTACTCTTGGAGTCTCCAAATCCGCGACCAACAAGGAGATTAAGGTGGCTTATCGAAAGTTAGCTCGTCAGTACCATCCTGACGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATCAGTGCTGCATATGAGGTGCTATCAGATGATAAGAAGAGGGCATTGTATGATCAATATGGAGAGGCTGGAGTTAAGAGTACGGTAGGAGGAGCAAATGCTTATACGACTAATCCATTTGATTTGTTCGAGACATTTTTCGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCAACTGGCTTTGGAACACGCCGCCGCAGTACTGTTACTAAGGGTCAAGACATTCGTTACGATATTCTGTTGGAATTTTCTGAGGCAATTTTTGGAGCTGAAAAGGAATTTGAGCTTTCACATTTGGAAAAATGTGAAGCTTGTAATGGTACTGGAGCAAAGATTGGCTCCAAGATGAGAATATGTTCGACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGCTTGTTCTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGGATGGTGAAGTCATATCTGAATTTTGTCGTAAATGTAATAGTGAAGGACGTATTCGGGTTAAGAAAAATATTAAAGTGAAAGTTCCTCCAGGGGTTAGCCCAGGCAGCATTCTGAGAGTTGCTGGGGAGGGTGATGCTGGACCTCGAGGGGGTCCCCCTGGAGATCTATTCGTGTATCTTGAAGTAGAAGAGATTCCAGGAATTCAAAGAGATGGCATTAATCTCTCTTCAACGATAACAATCAATTATCTGGATGCCATACTAGGGGTTGTTGTCAAGGTAAATACAGTTGAAGGCATTTCTGAACTACAAATTCCCCCCGGTACCCAACCTGGAGATGTCCTTGTCCTTGAGAGGAAAGGTGCACCAAAATTAAACAAACCATCAATACGTGGTGACCACTTATTTACAGTTAAAGTTATGATACCAAAACGTATCAGTTTAAAGGAGCGTGAGTTGCTTGAAGAACTTGCTTCACGAGGCAGCAAAACAAGCAGCCGTTCAAAACCCCGTCCTAGCATTCACTCTTCCAAGGGAAGGGCTGAAGATTCTGTAGCTCAAAGTGCTGAAAGTCCAACAGTAGTTGAAGAAAAAACTGAACAGTCAGAAGACCAAGATGACGTATGGAATAAATTGAAGAATTTTGCTGGGTCTGTCGCAAATGGAGCTCTGAAGTGGCTAAAAGATAACCTGTAG 1503 0.4438 MAIVSFSFRPYLHLPSAPSSSSSSSSSSSFLCGGVHLRTHKNFISIHSPSHFSSSTLNSRSSSRSFRTAIAASGDYYATLGVSKSATNKEIKVAYRKLARQYHPDVNKEPGAIDKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGANAYTTNPFDLFETFFGPSMGGFAGMDPTGFGTRRRSTVTKGQDIRYDILLEFSEAIFGAEKEFELSHLEKCEACNGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEFCRKCNSEGRIRVKKNIKVKVPPGVSPGSILRVAGEGDAGPRGGPPGDLFVYLEVEEIPGIQRDGINLSSTITINYLDAILGVVVKVNTVEGISELQIPPGTQPGDVLVLERKGAPKLNKPSIRGDHLFTVKVMIPKRISLKERELLEELASRGSKTSSRSKPRPSIHSSKGRAEDSVAQSAESPTVVEEKTEQSEDQDDVWNKLKNFAGSVANGALKWLKDNL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5644g00034 500 CDD DnaJ_C 192 415 - -
Pral5644g00034 500 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 423 IPR008971 GO:0006457|GO:0051082
Pral5644g00034 500 Pfam DnaJ central domain 221 285 IPR001305 GO:0031072|GO:0051082
Pral5644g00034 500 Gene3D DnaJ domain 72 175 IPR036869 -
Pral5644g00034 500 SUPERFAMILY Chaperone J-domain 73 180 IPR036869 -
Pral5644g00034 500 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 288 IPR036410 -
Pral5644g00034 500 CDD DnaJ 75 128 IPR001623 -
Pral5644g00034 500 Gene3D - 221 285 - -
Pral5644g00034 500 FunFam Chaperone protein dnaJ A6 chloroplastic 221 285 - -
Pral5644g00034 500 CDD DnaJ_zf 221 285 IPR001305 GO:0031072|GO:0051082
Pral5644g00034 500 ProSiteProfiles Zinc finger CR-type profile. 208 290 IPR001305 GO:0031072|GO:0051082
Pral5644g00034 500 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 333 IPR008971 GO:0006457|GO:0051082
Pral5644g00034 500 Hamap Chaperone protein DnaJ [dnaJ]. 72 484 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pral5644g00034 500 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 28 436 - -
Pral5644g00034 500 FunFam Molecular chaperone Hsp40/DnaJ family protein 337 429 - -
Pral5644g00034 500 MobiDBLite consensus disorder prediction 449 464 - -
Pral5644g00034 500 NCBIfam molecular chaperone DnaJ 75 428 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pral5644g00034 500 MobiDBLite consensus disorder prediction 427 478 - -
Pral5644g00034 500 Pfam DnaJ C terminal domain 194 412 IPR002939 -
Pral5644g00034 500 Gene3D - 191 327 - -
Pral5644g00034 500 FunFam Putative Mitochondrial DnaJ chaperone 279 327 - -
Pral5644g00034 500 SMART dnaj_3 74 131 IPR001623 -
Pral5644g00034 500 Pfam DnaJ domain 75 136 IPR001623 -
Pral5644g00034 500 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Pral5644g00034 500 Gene3D - 337 429 - -
Pral5644g00034 500 PRINTS DnaJ domain signature 77 95 IPR001623 -
Pral5644g00034 500 PRINTS DnaJ domain signature 131 150 IPR001623 -
Pral5644g00034 500 PRINTS DnaJ domain signature 95 110 IPR001623 -
Pral5644g00034 500 PRINTS DnaJ domain signature 111 131 IPR001623 -
Pral5644g00034 500 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Pral5644g00034 500 FunFam Chaperone protein dnaJ A6 chloroplastic 72 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5644g00034 Pral-Chr5644 200462 207292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5644g00034 61 181 C2H2 Transcription Factor Family AT1G74250 36.567 9.30e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5644g00034 K03686 - gmx:100798567 724.546