Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5641g00002 ATGGAGAACTTCAAGACGCCCTTCAAGGGTGTAGTTAGTGATATCCGAGGAAGAGGCAAGTATTACAAGGAAGATTGGATTTCTGGTATCTGTTCAGGAATCGGGATATTGGCTCCGACCACCTATATTTTCTTTGCTTCTGCTCTTCCTGTTATAGCCTTTGGAGAACAGATCGATAGAGACACAGATGGAAGCTTGACTTCAGTAGAAGCACTGGCTTCAACTGCTATATGTGGAATCATACACTCAATTCTGGGAGGTCAGCCATTGTTAATACTGGGAGTTGCAGAACCCACTATCATCATGTACACTTACTTATACAAGTTTGCTAAAGATAGAGATGATTTGGGGCCACAACTCTTCTTGGCTTGGGCTGCATGTTGCAAACATTTTTATATTAAACTAACAAGATCTAACATGGTCTGCGTAATTTGTACAGGAAAGTTAAGAAGTTTCTTGGCAGACTATGGGGTTCCTTTAATGGTGGTAGTGTGGACAGCTTTGTCTTTCACAGTACCAAGCAAACTTCCCTCTGGAGTCCCTAGAAGGCTCTTTGCCCCTCTTGCTTGGGAATCTTCTTCTTTACACCATTGGACAGTAATCAAAGACATGGGGAAGGTTCCACCTGCATATATTTTTGGTGCTATTATCCCTGCATTGATGATTGCGGGTCTTTACTTCTTCGATCATAGCGTTGCTTCTCAAATGGCACAACAGAAGGAATTCAATCTCAAGAAGCCTTCTGCTTATCATTATGACGTGTTGCTTCTAGGATTCATGACTTTGCTTTGTGGGTTGCTTGGTTTGCCACCTTCCAATGGAGTTCTTCCTCAATCGCCCATGCACACCAAAAGCCTTGCTGTTCTCAAGAAACAGTTGATTCGAAGGAAGATGATGCAAAGTGTGAAAGAAAGCATGAGGCACAAAGCAAGCAGTTCTGAGATCTATGGAAACATGCAACAAGTGTTTGTAGAAATAGACAAAAGCCCAATTAATACAGTGGTGAAAGAATTAGAGGACCTGAAAGATGCTGTGCTAAAAGAAGAAGAGAAAGAAACATTTGACCCTGCCAAACACATTGACAAACATCTGCCCATAAGAGTGAACGAGCAAAGGGTGAGCAATCTGGTGCAAGCATTGCTTGTAGGAGGATCTGTGTTTGCCATGCCTGTGATCAAGAAGATACCCACTTCAGTTCTGTGGGGTTATTTTGCTTACATGGCCATTGATAGTCTTCCCGGAAATCAGTTCTGGGAAAGAATAATATTTATCTTCATATCTCCCAATAGACGATACAGGGTGTTTGAAGGGGACCATGCTTCGTTTGTAGAGACAGTACCAATGAGAGCAATATTGTTCTTCACACTGTTCCAATTTGTATATTTGTTGGTTGTCTTTGGAGTGACATGGATTCCCATGGCAGGAATCTTGTTTCCTTTGCCTTTCTTTGTGTTGATCATAATAAGGCAGTATCTGCTACCCAAGCTGTTCAGCCCTAAGCATTTAAAGGAACTTGATGCTGCTGAATATGAAGAAATCGCTGCTACCCCAAGACTCTCCTTCCGTCTCTCTTCTTCCCAGGATGCGGATTCAGCAAGTAGGGGATCAAGGGAAATAGGTGATGGTGAGATATTAGACGAGGCCACAACTGGTAGAGGAGAGTTGAAGGTCGTCAAAACATTTAGCTTCAGATCAGAGGATCAGATACATGCATATCCACAGGCGTTGCAAGTGTGCCCTGATGAAATCCAGAGCGAATAG 1761 0.4276 MENFKTPFKGVVSDIRGRGKYYKEDWISGICSGIGILAPTTYIFFASALPVIAFGEQIDRDTDGSLTSVEALASTAICGIIHSILGGQPLLILGVAEPTIIMYTYLYKFAKDRDDLGPQLFLAWAACCKHFYIKLTRSNMVCVICTGKLRSFLADYGVPLMVVVWTALSFTVPSKLPSGVPRRLFAPLAWESSSLHHWTVIKDMGKVPPAYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDVLLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMMQSVKESMRHKASSSEIYGNMQQVFVEIDKSPINTVVKELEDLKDAVLKEEEKETFDPAKHIDKHLPIRVNEQRVSNLVQALLVGGSVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERIIFIFISPNRRYRVFEGDHASFVETVPMRAILFFTLFQFVYLLVVFGVTWIPMAGILFPLPFFVLIIIRQYLLPKLFSPKHLKELDAAEYEEIAATPRLSFRLSSSQDADSASRGSREIGDGEILDEATTGRGELKVVKTFSFRSEDQIHAYPQALQVCPDEIQSE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5641g00002 586 Pfam HCO3- transporter family 366 456 IPR011531 GO:0006820|GO:0016020
Pral5641g00002 586 Pfam HCO3- transporter family 147 293 IPR011531 GO:0006820|GO:0016020
Pral5641g00002 586 Pfam HCO3- transporter family 7 114 IPR011531 GO:0006820|GO:0016020
Pral5641g00002 586 PANTHER ANION EXCHANGE PROTEIN 145 514 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pral5641g00002 586 Coils Coil 331 351 - -
Pral5641g00002 586 Gene3D Helical hairpin bin 18 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5641g00002 Pral-Chr5641 13727 17611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5641g00002 146 574 Antiporters AT1G15460 68.018 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5641g00002 K24194 - qsa:O6P43_027841 629.402