Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5640g00001 ATGGACAGCTTGAAGACACCTTTCAAGGGCGTAGTTAATGATTTCCGAGGAAGAAAAAAATGTTACAAAGAAGACTGGATTGCTGGTCTCTGTTCAGGAATCGGGATATTGGCTCCAACTACCTATATCTTCTTCGCTTGTGCTCTTCCTGTTATAGCCTTTGGAGAACAGCTCGATATAGCCACAGATGGAAGCCTGAGTCCAGTAGAAACACTGGCTTCAACTGCTATATGTGGAATCATACACTCAGTTATTGGAGGCCAACCCCTAATAATATTAGGAGTCGCAGAGCCCACTATCGTCATGTACATTTACATGTACAAGTTTGCTAAAGAAAGAGATGGTTTGGGACGACAACTTTTCTTAGCTTGGGCTGCATGGACTTGCGTTTGGACGGCTCTGATGTTGTTTCTTCTCGCAATATTCAATGTTGGTGGCATTGTACATAGATTCACCAGGATTGCTAGCGAGCTTTTTAGCATGTTGATCACAGTCATCTTCCTTAAAGAGGCTATCAAGGGAATGGTGAGTGAGTTTAAGGCTCCTAAACACGGGACCGAGCACCCAGCATTAGAGAAAAACAAATTTCAGTGGCTTTATGCAAATGGACTATTGGGAATTATATTCTCTTTTGGCCTTCTCTTTTCCACTCTCAAGATCAGGAAAGCCAGATCATGGTTATACGGCACAGGGAAATTGAGAAGTTTCTTTGCAGACTACGGGGTTCCGCTAATGGTGGTACTGTGGACAGCCTTGTCTTTCACAGTACCAAGTAACAAACTTCCCTCTGGAGTTCCTAGAAGGCTCATTGCTCCTCTTGCTTGGGAATCTACTTCTTTACATCATTGGAAAGTCGTCCAAGATATGGTGAAGGTCCCACCTGCATATATTTTTGCTGCTATTATTCCTGCACTGATGATTGCGGGTCTTTACTTCTTCGATCATAGTGTTGCTTCTCAGTTAGCAGAACAGAAGGAATTCAACCTGAAGAAACCTTCTGCTCATCACTATGACTTTTTGTTGCTAGGATTCCTGACTTTGCTTTGTGGGTTGATTGGTTTGCCACCTTCCAGTGCACTTCTTCCTCAGTCCCCCATGCACACTAAAAGCCTTGCTGTTCTCAAGAAACAGTTGATTCGGAGGAAGATGGTGGAGAGTGCCAAAGAAAGCATAAGGGGCAAAGCAAGCAACTCTGAGATCTATGGAAATATGCAAGCAGTGTTCATAGAAATAGATAAAAGCCCAATTACTTCAGTGGTTAAAGAACTAGAGGACTTAAAGGAAGCAATCCTAAAAGGGGAAGAGAAATCGGATAGTAAATTTAACCCTGAGACACATATTGATGAACATCTGCCCATAAGAGTGAAAGAGCAAAGAGTGAGCAATCTGTTACAGGCAATACTTGTTGGAGCATCTGTATTTGCTTTACCTCTTTTAAAGAAGATACCCACTTCAGTTATGTGGGGTTACTTCGCTTACATGGCCATTGATAGTCTTCAAGGAAATCAATTCTGGGAAAGAATACTTTATATCCTCATATCCCCCAACAGACGATACAAGGTGTTGGAGGGGGACCATGCTTCATTTGTAGAGACAGTACCATTCAGAGCCATACTGTTCTTCACACTGTTCCAATCTGTTTATCTGTTGATATGTTTCGGAGTGACTTGGATTCCCATGGCAGGAATGTTGTTTCCTCTGCCCTTGTACTTTCTCATCATAATAAGGCAATATCTGTTACCAAAGCTCTTCAATCCTCAGCATTTGAAGGAACTTGATGCTGCTGAGTATGAAGAAATTGCAGGCACTACTTCAAGGCTTTCCTTCCGTCACTCTTCTCGTCTCAATCTCCACCAGGATATGAAATCACCAAGCATGGAAAGAAGGGAAATGGATGAAGAAGAAGAAGATGATGACGACGATGATGAGATATTAAACGAGGCCCTAACAGGGAGAGGAGAGTTAAAAGTGAAAGCTATTAGTTTCAGAGAGGAAAGACATGCACGTGCACACGTACCCAGAGACTTAAACTTGAAGGTCAAAGCTATTAGCTTCAGAGATGAAAGACATGCACGTGCACAGGGGTTGCAAGTCTATCCTGATGAAATTATAATTGAAACGGATTCGTAG 2130 0.4244 MDSLKTPFKGVVNDFRGRKKCYKEDWIAGLCSGIGILAPTTYIFFACALPVIAFGEQLDIATDGSLSPVETLASTAICGIIHSVIGGQPLIILGVAEPTIVMYIYMYKFAKERDGLGRQLFLAWAAWTCVWTALMLFLLAIFNVGGIVHRFTRIASELFSMLITVIFLKEAIKGMVSEFKAPKHGTEHPALEKNKFQWLYANGLLGIIFSFGLLFSTLKIRKARSWLYGTGKLRSFFADYGVPLMVVLWTALSFTVPSNKLPSGVPRRLIAPLAWESTSLHHWKVVQDMVKVPPAYIFAAIIPALMIAGLYFFDHSVASQLAEQKEFNLKKPSAHHYDFLLLGFLTLLCGLIGLPPSSALLPQSPMHTKSLAVLKKQLIRRKMVESAKESIRGKASNSEIYGNMQAVFIEIDKSPITSVVKELEDLKEAILKGEEKSDSKFNPETHIDEHLPIRVKEQRVSNLLQAILVGASVFALPLLKKIPTSVMWGYFAYMAIDSLQGNQFWERILYILISPNRRYKVLEGDHASFVETVPFRAILFFTLFQSVYLLICFGVTWIPMAGMLFPLPLYFLIIIRQYLLPKLFNPQHLKELDAAEYEEIAGTTSRLSFRHSSRLNLHQDMKSPSMERREMDEEEEDDDDDDEILNEALTGRGELKVKAISFREERHARAHVPRDLNLKVKAISFRDERHARAQGLQVYPDEIIIETDS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5640g00001 709 Pfam HCO3- transporter family 191 377 IPR011531 GO:0006820|GO:0016020
Pral5640g00001 709 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Pral5640g00001 709 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016020
Pral5640g00001 709 Gene3D Helical hairpin bin 18 59 - -
Pral5640g00001 709 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pral5640g00001 709 MobiDBLite consensus disorder prediction 620 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5640g00001 Pral-Chr5640 7951 12118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5640g00001 5 666 Antiporters AT1G74810 63.205 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5640g00001 K24194 - qsa:O6P43_027841 931.398