Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5624g00008 ATGGCATCAAGCTCAATGTCATCCTCAGGGTCATGGTCTGCTAAGGACAACAAAGCCTTTGAAAGGGCTCTTGCAGTTTACGACAAGGACACTCCTGACCGTTGGTACAACGTTGCCAAGGCTGTTGGTGGGAAAACTCCTGAGGAAGTAAAGAGACACTACGATCTCCTTGTGGAGGACGTGAAACACATAGAATCAGGACGGGTGCCCTTTCCTAACTACAAGAGAACTGGAGGCTCTGACGAGGAAAAAAGGCTGAGGAACTTGAAGCTCCAGTGA 279 0.491 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVAKAVGGKTPEEVKRHYDLLVEDVKHIESGRVPFPNYKRTGGSDEEKRLRNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5624g00008 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Pral5624g00008 92 MobiDBLite consensus disorder prediction 77 92 - -
Pral5624g00008 92 Gene3D - 2 71 - -
Pral5624g00008 92 FunFam Transcription factor SRM1 4 71 - -
Pral5624g00008 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pral5624g00008 92 SMART sant 8 60 IPR001005 -
Pral5624g00008 92 MobiDBLite consensus disorder prediction 70 92 - -
Pral5624g00008 92 SUPERFAMILY Homeodomain-like 4 62 IPR009057 -
Pral5624g00008 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pral5624g00008 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Pral5624g00008 92 CDD SANT 18 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5624g00008 Pral-Chr5624 38346 39150 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5624g00008 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5624g00008 - - csav:115700854 159.458