Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5624g00002 ATGGAAGCCAAAAGCCTTGAGGAGTGGAGAAAATATTTTGAGAGTGGAAACTGCAGCATCTACCGGATCATCTTCAATGCGATAAGAATTGCTGCTTTGGATGATCCAGAAGAGTTCAAACTTCGCAGAAACAAGATCGTTGAGAGGCTCTACTCTTGCCAATTCACTGGGTTGTGTGCTGCTGCTGCGTTGATCACGGAGAGAGATATTCATAGCACCATTAAACAAGTTTTCCAGCACTGCGAAAATGCATGTGCTCATCACAAGAGCACTAAGGTCGTCGATGATTCCGCAGTCGGAGGAGCGACAGCGACCGATCAGCAGGCCAATGAACCAGGAAACAACGATGAAGACGAAGACGAAACTGTTCGCTGTGTTTTGCAGATTAGGGATGAGCTTGAGAGCAACGAGCTGACGGACAGTGAAATCTACGGGTCACTAAAGAAGTTGCAATTGGTGGTTCAATCAGTTTTCGTTATGGAGGCTACAAAAATAGGGAAAACAATAAGTAATCTTAGGCGCCACAGGACGAAGGAGATCAGTCTTTTAGCAACAATTATGGCTGACCAATGGAAGTCAAAGATTGTGGAGTTTGTGGATAATAAAACGGCAGGAACTACTGCAGAAAAATCCAAAAACCCTGTGCCTAGATTTGTTCTTGACGAGTGGCGAGAATTTCCTTCTGTTGAATATGTTCCTCAGCCTCCAGTGGAGTTCTCAGAGGTATAA 729 0.4472 MEAKSLEEWRKYFESGNCSIYRIIFNAIRIAALDDPEEFKLRRNKIVERLYSCQFTGLCAAAALITERDIHSTIKQVFQHCENACAHHKSTKVVDDSAVGGATATDQQANEPGNNDEDEDETVRCVLQIRDELESNELTDSEIYGSLKKLQLVVQSVFVMEATKIGKTISNLRRHRTKEISLLATIMADQWKSKIVEFVDNKTAGTTAEKSKNPVPRFVLDEWREFPSVEYVPQPPVEFSEV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5624g00002 242 Pfam TFIIS helical bundle-like domain 147 194 IPR017923 -
Pral5624g00002 242 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 228 IPR044805 -
Pral5624g00002 242 SMART TFS2_5 123 197 IPR003617 GO:0005634
Pral5624g00002 242 ProSiteProfiles TFIIS N-terminal domain profile. 124 198 IPR017923 -
Pral5624g00002 242 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 122 195 IPR035441 -
Pral5624g00002 242 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 126 205 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5624g00002 Pral-Chr5624 21260 23919 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral5624g00002 Med26 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5624g00002 - - pcin:129305584 207.994