Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00014 ATGGAAATGATGCCGTACCAGCTTTCCCGATTACCTTACCAGGATTCCCTCAAAATGCTGGAGGCTGATATTCAGCATGCCAATGCTTTGGCTGCTGCGATTCCGAGAGCCAAGGGTGGGACTCTTCTTCAGATGAAATTGGTTTACAATGACTGGGCCCCACTCTTTCTCTTCTTGCTACAATGGATGGATTGCTCTTGCGCTTGCTTTCTTCAAAGATATCTGAGCTTCTTTCATGTGCTTATCTATAAGGTTCACAAAGAGGGAAGATCAACCATATCTGCTTATGGAAGGAAGGCTACCATCAGGGACTTTTATGCCGTTATATTGCCATCTCTCCAGCGGCTTCAGGGGAGCTTGGAGAAGTTGGAAGTTCCTAAGGAAGGTTATTCGAGCATAGAAGGTTCCAGTTCTAAGAAGAAGAAGATCGAAGCAGATGGGAGACTAAGCAGTGTGGATCTTGAGAGAGAGGACGAATGTGGAATCTGCTTGGAGGGTTGCACCAAAATGGTTTTGCCTAATTGCTGCCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAGAAGGTCAGAGTCTTGTCCATTTTGTCGCGGTAGCTTGAGGAGAGTTAATTCAGAGGACTTATGGGTGCTAACCTGTAATGACGACGTTGTCGATGCCGAAACAGTGTCCAAGGAGGACTTGTTGCGATTCTACCTCTACATCAATAGCTTACCTAAAGATTACCCAGATGCACTCTTCCTAATGTATTATGAATACTTAATTTGA 771 0.4501 MEMMPYQLSRLPYQDSLKMLEADIQHANALAAAIPRAKGGTLLQMKLVYNDWAPLFLFLLQWMDCSCACFLQRYLSFFHVLIYKVHKEGRSTISAYGRKATIRDFYAVILPSLQRLQGSLEKLEVPKEGYSSIEGSSSKKKKIEADGRLSSVDLEREDECGICLEGCTKMVLPNCCHAMCIKCYRKWNRRSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYINSLPKDYPDALFLMYYEYLI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00014 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Pral5621g00014 256 SMART ring_2 160 197 IPR001841 -
Pral5621g00014 256 FunFam RING/U-box superfamily protein 140 207 - -
Pral5621g00014 256 Pfam Ring finger domain 158 198 IPR001841 -
Pral5621g00014 256 PANTHER RING FINGER PROTEIN 41, 151 12 254 - -
Pral5621g00014 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 209 IPR013083 -
Pral5621g00014 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
Pral5621g00014 256 SUPERFAMILY RING/U-box 151 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00014 Pral-Chr5621 224801 227496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00014 151 207 C3H Transcription Factor Family AT5G47610 42.188 6.36e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00014 - - gmx:100790422 440.269