Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00013 ATGGGTGTATTTTCTCTACTGATTATACTTATATTTTATCTTTTAATTTCACCTGCAGTATGCCAAGTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACTGGTAATTACACTGATAAAAGCACAGGACTGGCATGGATTTCAGACAATGGGATTATGAACCATGGCAACCAAGTGGAAGTAGAAGGTCCAAATGGAAACAGGATACAGTATCAGAAACGCAGAGACTTCCCCACAGACAACAGGAAATACTGTTACACACTAAACACACGGGAGAGAAGAAGATACCTGGTGCGAGCAACGTTTCAGTATGGAAACTTGAAAAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATATGATGCCTCAAGAGTTTATGTGAAGGAAATGATTATCAGGGCCCCCTCAAACTCTATTGATGTTTGCTTGTGTTGTGCTACCACTGGTTCACCATTCATATCAACTCTAGAGCTCAGGCCCTTGAATCTTTCAATGTATGCCACAGATTTTGAAGACAATTTCTTCTTAAAAGTCGCTGCAAGAATCAATTTTGGCGCTTCAAGTGAGGATGCTATCAGGTATCCTGATGACCCCTATGATAGAATTTGGGAATCAGATCTTGTTAAAAGGCAAAATTATCTTGTTGGGGTGGCCCCAGGCACCGAAAGGATTAATACAACAAGGGACATAGAGATAGGAAGTAGAGAATGCCCACCTGTCAAAGTTATGCAAACTGCAGTTGTTGGCACAAGGGGGGTACTCAGCTACAGAACTAACCTGGAAGACTTCCCAGCCAATGCTCGAGCTTATGCTTATTTCGCAGAGATTCAAGATCTGGGTAAGAATGAGACTCGAAAATTCAAAATGGAGCAGCCTTTTATACCTGACTATAGCAATGCAGTGGTCAACATAGCTGAGAATGCCAATGGCAGCTACACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGATTTTGTTCTGTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACTGATTGCTCCAAAGACTGACAGGCAAGATTTGACTGTTGTAAATGAATTTTCCTCCATGTCCGCTGAAAGTGTCCAGAAGAACGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGCAGTGCTGCCACGCTTCCAAGAATCACAAAACTAAACCTGTCAAGAAGGAAAGTTACGGGCACAATCCCATCTGATATTAACAAAGTGGAAGAATTGACAGAATTGTGGTTGGATGGAAATTTGATTACTGGCTCACTGCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACCGATTGAGGGGTCCATTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTGTTCATACAAAATAACTCATTTACTGGGGAAATACCAGCAGGATTAGTATCTGGAAAGATCATTTTCAACTATGACGGTAATCCTGGACTACATAAAGGGACCAAGAAACACTTCAAGCTGATACTCGGAATTTCGATAGGAGTTCTTGTGATTCTCGCAATATTATTTTTAGGAAGTTTGATGCTAATGCATAATCTTCGGAAGGCATCTCAACAGAAATGTGATGAAAATGGTATCTCTGGACGCAGTATGACCAAACCTATAGGTCCATACTCATTTGTTCGGGGAGGGAGTCTAATGGAGGAGGGCATTGCATGCTATATGGGGCTCTCAGACTTGAAAGAAGCTACTAATAATTTTGCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTGTACTATGGGAAAATGAAAGATGGAAAAGAAGTTGCTGTTAAAATTATGAGTGATTCATCCACCTATGGAAACCATCAATTTGTCACTGAGGTAGCCCTTCTGTCAAGAATTCATCATAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCGTATTCTGGTTTACGAGTATATGCACAATGGCACCTTGCGGGATCACATTCATGGTTCTGCTAAGCAGGAAAACTTAGACTGGTTAATTCGTCTTCGCATAGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACATACAGGATGCAATCCAAGTATCATACACCGAGATGTGAAGACCAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGATTAGCTGAAGAAGATTTAACTCACATATCAAGTATTGCCAGGGGAACTGTAGGTTACTTGGATCCTGAGTACTATGCAACTCAGCAATTGACCGAGAAAAGTGACGTGTATAGCTTTGGAGTTGTACTTCTTGAACTGATCGCCGGAAGAAAGCCTGTATCATCAGAAGATTACGGTGCTGAAATGAACATTGTTCACTGGGCAAGGTCATTAATTCGCAGAGGCGATGTGATAAGCATCATGGATCCATGTTTAGTGGGGAACGTCAAAACCGAATCGATTTGGAGGGTTGCTGAAGTCGCACTGCAATGCGTAGAACAACACGGGGCGTGCAGGCCCAGGATGCAAGAGATCATTCTGGCTATACAAGAAGCAATCAACATCGAGAAAGGAACAAACAGAAGCATGAAATTATCATCCTCAGGTAGTTCGAAGGCTCAATCTTCGAGGAAAACATTACTCACAAGCTTTCTCGAAATTGAGAGCCCTGACTTGTCCAATAATTGCCTCCCTACCGCAAGATAA 2790 0.4183 MGVFSLLIILIFYLLISPAVCQVQEFISIDCGGTGNYTDKSTGLAWISDNGIMNHGNQVEVEGPNGNRIQYQKRRDFPTDNRKYCYTLNTRERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSNSIDVCLCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARINFGASSEDAIRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTRDIEIGSRECPPVKVMQTAVVGTRGVLSYRTNLEDFPANARAYAYFAEIQDLGKNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLDFVLSFSFVKTRDSTRGPLLNAMEISKYQLIAPKTDRQDLTVVNEFSSMSAESVQKNEGDPCVPTPWEWVNCSAATLPRITKLNLSRRKVTGTIPSDINKVEELTELWLDGNLITGSLPDMSNLINLKIVHLENNRLRGPLPSYLGSLPSLEALFIQNNSFTGEIPAGLVSGKIIFNYDGNPGLHKGTKKHFKLILGISIGVLVILAILFLGSLMLMHNLRKASQQKCDENGISGRSMTKPIGPYSFVRGGSLMEEGIACYMGLSDLKEATNNFAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSSTYGNHQFVTEVALLSRIHHRNLVPLIGYCEEECQRILVYEYMHNGTLRDHIHGSAKQENLDWLIRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSSEDYGAEMNIVHWARSLIRRGDVISIMDPCLVGNVKTESIWRVAEVALQCVEQHGACRPRMQEIILAIQEAINIEKGTNRSMKLSSSGSSKAQSSRKTLLTSFLEIESPDLSNNCLPTAR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00013 929 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Pral5621g00013 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Pral5621g00013 929 Gene3D Ribonuclease Inhibitor 370 511 IPR032675 -
Pral5621g00013 929 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5621g00013 929 PANTHER OS07G0107800 PROTEIN-RELATED 27 881 - -
Pral5621g00013 929 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Pral5621g00013 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Pral5621g00013 929 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 407 500 - -
Pral5621g00013 929 Pfam Malectin-like domain 29 362 IPR024788 -
Pral5621g00013 929 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5621g00013 929 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 683 890 - -
Pral5621g00013 929 FunFam serine/threonine-protein kinase PBS1-like 586 682 - -
Pral5621g00013 929 Gene3D Transferase(Phosphotransferase) domain 1 683 901 - -
Pral5621g00013 929 SUPERFAMILY L domain-like 398 505 - -
Pral5621g00013 929 SUPERFAMILY Protein kinase-like (PK-like) 597 874 IPR011009 -
Pral5621g00013 929 Gene3D Phosphorylase Kinase; domain 1 591 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00013 Pral-Chr5621 203268 208593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00013 1 929 Receptor kinase-like Gene Family AT1G67720 67.918 0.0 1283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5621g00013 Malectin_like 2.1e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00013 - - gmx:100807148 1521.91