Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5621g00009 ATGGTGAAACCATCGTCTCTCACACCTCAACATCTTCGTCATTACCATCTCTCCTTCATCGACCAGATAACTCCCCAAATCAACAATTCTATGGTCTACTTCTTCAATGCCGATGATGTCACAGACAAATTTAACATCAACGAAGCTTCCGATGTTCTCAAGAAATCATTATCTCAAGTCTTAACCCACTACTACCCACTCGCCGGAAGACTCATAACCAACAACTTAGTCGTAGACTGCAACGACGAGGGTGTCCCTTACGTAGAAACCAGAGTCAGGTGCCACCTCAGCACCGTCATCGGCAACCCGTCTCCGGCCGACGTCAGGAAACTGCTTCCCTACGACATGGATGAAATCGTCGATACAGTCCTAGGTGTCCAATTCAATGTCTTCGATTGCGGCGGAATAGCCGTCGGTGTAAGCCTCTCCCATAAGATCGCCGACGCGCTGTCGTATTTTGAGTTCATCAAGAGCTGGGCAGCCATGACACGCGGCGAATCACAGCCAATAAAAACCCACTTTCAATCTTCCTCACTCTTCCCGACAAAAGACTTGTTAGGATACGACCCGAATTCACACATCGGAAACCACAAAATCGTGGGAAAGCGGTTCGTATTTGAAGCATCGGTAATAGAATCTCTGAGAACAAAATATTCAAGAAAGGTCATTGAAGAAGGCCTAAAACCTCCTTCAAGACTAGAAGTGTTATCAACTTTCTTATTGAACCGGTTTATTGCTTCAACTAAAGAAGAAGGGGACAAGAAAAAGATTGACATGGTGACATCCACAGTGAATCTACGCACAAGAATGGATCCTCCATTGCCAGAATATGCGTTCGGGAACTATTACTGGTATGTTCAAATGTTTTCAACGTTAGATGAGAAAGGAGAGAACAACGACGACTTGGGAAGACAGTTAAAAGAAGAGATAAACAAAGTGGACAGCGATTTTATTGTGAAGCTTCGGGAAAGCAAAGAATGGAATCCTAATAGAGAAGATATGGCTAAAGCTATTGAGAAGGGTGAGTTGGTGCCTGTTACCTTCACTTCACTGTGTAGGTTTCCCGTGTACGAGGTTGATTTTGGATGGGGTAATCCTACGTGGACAGGACCGCCTACGTGGAAATTCAAGAATGTAATTGTTTTTAAAGACACCAAGTCAGGTGGAGGCATTGAGGCGTACGTCAACTTGACGAAGGATGACATGGCTAAATTTGAACGTGATGAGGAGCTTCTTGCTCACGTTTCTACAAAGGGGTTGAAATAA 1266 0.4447 MVKPSSLTPQHLRHYHLSFIDQITPQINNSMVYFFNADDVTDKFNINEASDVLKKSLSQVLTHYYPLAGRLITNNLVVDCNDEGVPYVETRVRCHLSTVIGNPSPADVRKLLPYDMDEIVDTVLGVQFNVFDCGGIAVGVSLSHKIADALSYFEFIKSWAAMTRGESQPIKTHFQSSSLFPTKDLLGYDPNSHIGNHKIVGKRFVFEASVIESLRTKYSRKVIEEGLKPPSRLEVLSTFLLNRFIASTKEEGDKKKIDMVTSTVNLRTRMDPPLPEYAFGNYYWYVQMFSTLDEKGENNDDLGRQLKEEINKVDSDFIVKLRESKEWNPNREDMAKAIEKGELVPVTFTSLCRFPVYEVDFGWGNPTWTGPPTWKFKNVIVFKDTKSGGGIEAYVNLTKDDMAKFERDEELLAHVSTKGLK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5621g00009 421 PANTHER F21J9.9 1 415 - -
Pral5621g00009 421 Coils Coil 292 312 - -
Pral5621g00009 421 Gene3D - 196 416 IPR023213 -
Pral5621g00009 421 Gene3D - 1 187 IPR023213 -
Pral5621g00009 421 Pfam Transferase family 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5621g00009 Pral-Chr5621 66450 67715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5621g00009 1 407 Monolignol Biosynthesis Gene Families AT5G48930 23.502 1.67e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5621g00009 K13065 - gmx:100801695 471.47